rs80338909
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;C) | 5 | tendency for multiple cutaneous and mucosal venous malformations |
(A;G) | 5 | tendency for multiple cutaneous and mucosal venous malformations |
Make rs80338909(C;C) |
Reference | GRCh38 38.1/141 |
Chromosome | 9 |
Position | 27212710 |
Gene | TEK |
is a | snp |
is | mentioned by |
dbSNP | rs80338909 |
dbSNP (classic) | rs80338909 |
ClinGen | rs80338909 |
ebi | rs80338909 |
HLI | rs80338909 |
Exac | rs80338909 |
Gnomad | rs80338909 |
Varsome | rs80338909 |
LitVar | rs80338909 |
Map | rs80338909 |
PheGenI | rs80338909 |
Biobank | rs80338909 |
1000 genomes | rs80338909 |
hgdp | rs80338909 |
ensembl | rs80338909 |
geneview | rs80338909 |
scholar | rs80338909 |
rs80338909 | |
pharmgkb | rs80338909 |
gwascentral | rs80338909 |
openSNP | rs80338909 |
23andMe | rs80338909 |
SNPshot | rs80338909 |
SNPdbe | rs80338909 |
MSV3d | rs80338909 |
GWAS Ctlg | rs80338909 |
Max Magnitude | 5 |
rs80338909, also known as c.2690A>G, p.Tyr897Cys and Y897C, as well as c.2690A>C, Tyr897Ser and Y897S, represents a mutation in the TEK gene on chromosome 9.
Both the rare (G) and (C) minor alleles for this SNP are reported to cause Multiple cutaneous and mucosal venous malformations.
ClinVar | |
---|---|
Risk | rs80338909(C;C) rs80338909(G;G) |
Alt | rs80338909(C;C) rs80338909(G;G) |
Reference | Rs80338909(A;A) |
Significance | Pathogenic |
Disease | Multiple Cutaneous and Mucosal Venous Malformations |
Variation | info |
Gene | TEK |
CLNDBN | Multiple Cutaneous and Mucosal Venous Malformations |
Reversed | 0 |
HGVS | NC_000009.11:g.27212708A>C; NC_000009.11:g.27212708A>G |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000009877.2, RCV000022955.2, |
[PMID 10369874] Allelic and locus heterogeneity in inherited venous malformations.
[PMID 23566851] Association study between of Tie2/angiopoietin-2 and VEGF/KDR pathway gene polymorphisms and vascular malformations