rs80357254
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | Normal |
(A;T) | 6 | BRCA1 variant considered pathogenic for breast cancer |
Make rs80357254(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43091663 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357254 |
dbSNP (classic) | rs80357254 |
ClinGen | rs80357254 |
ebi | rs80357254 |
HLI | rs80357254 |
Exac | rs80357254 |
Gnomad | rs80357254 |
Varsome | rs80357254 |
LitVar | rs80357254 |
Map | rs80357254 |
PheGenI | rs80357254 |
Biobank | rs80357254 |
1000 genomes | rs80357254 |
hgdp | rs80357254 |
ensembl | rs80357254 |
geneview | rs80357254 |
scholar | rs80357254 |
rs80357254 | |
pharmgkb | rs80357254 |
gwascentral | rs80357254 |
openSNP | rs80357254 |
23andMe | rs80357254 |
SNPshot | rs80357254 |
SNPdbe | rs80357254 |
MSV3d | rs80357254 |
GWAS Ctlg | rs80357254 |
Max Magnitude | 6 |
rs80357254, also known as K1290X, c.3868A>T and p.Lys1290Ter, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80357254(G;G) rs80357254(T;T) |
Alt | rs80357254(G;G) rs80357254(T;T) |
Reference | Rs80357254(A;A) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome |
Reversed | 1 |
HGVS | NC_000017.10:g.41243680T>A; NC_000017.10:g.41243680T>C |
CLNSRC | ClinVar |
CLNACC | RCV000031135.6, RCV000048361.3, RCV000077134.2, RCV000218431.1, RCV000234532.1, |