rs80357579
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;AG) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(-;GA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(AG;AG) | 0 | common in clinvar |
(GA;GA) | 0 | common/normal |
Make rs80357579(-;-) |
Reference | GRCh38 38.1/142 |
Chromosome | 17 |
Position | 43091761 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357579 |
dbSNP (classic) | rs80357579 |
ClinGen | rs80357579 |
ebi | rs80357579 |
HLI | rs80357579 |
Exac | rs80357579 |
Gnomad | rs80357579 |
Varsome | rs80357579 |
LitVar | rs80357579 |
Map | rs80357579 |
PheGenI | rs80357579 |
Biobank | rs80357579 |
1000 genomes | rs80357579 |
hgdp | rs80357579 |
ensembl | rs80357579 |
geneview | rs80357579 |
scholar | rs80357579 |
rs80357579 | |
pharmgkb | rs80357579 |
gwascentral | rs80357579 |
openSNP | rs80357579 |
23andMe | rs80357579 |
SNPshot | rs80357579 |
SNPdbe | rs80357579 |
MSV3d | rs80357579 |
GWAS Ctlg | rs80357579 |
Merged from | Rs80357993 |
Max Magnitude | 6 |
rs80357579, also known as 3888delGA, c.3769_3770delGA and p.Glu1257Glyfs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | Rs80357579(AG;AG) rs80357579(-;-) |
Alt | Rs80357579(AG;AG) rs80357579(-;-) |
Reference | Rs80357579(GA;GA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41243777_41243778delCT |
CLNSRC | Breast Cancer Information Core (BRCA1) OMIM Allelic Variant |
CLNACC | RCV000031127.12, RCV000048325.6, RCV000131814.3, RCV000235232.2, |