rs80357623
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;CTAAT) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(CTAAT;CTAAT) | 0 | Normal |
Make rs80357623(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43067643 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357623 |
dbSNP (classic) | rs80357623 |
ClinGen | rs80357623 |
ebi | rs80357623 |
HLI | rs80357623 |
Exac | rs80357623 |
Gnomad | rs80357623 |
Varsome | rs80357623 |
LitVar | rs80357623 |
Map | rs80357623 |
PheGenI | rs80357623 |
Biobank | rs80357623 |
1000 genomes | rs80357623 |
hgdp | rs80357623 |
ensembl | rs80357623 |
geneview | rs80357623 |
scholar | rs80357623 |
rs80357623 | |
pharmgkb | rs80357623 |
gwascentral | rs80357623 |
openSNP | rs80357623 |
23andMe | rs80357623 |
SNPshot | rs80357623 |
SNPdbe | rs80357623 |
MSV3d | rs80357623 |
GWAS Ctlg | rs80357623 |
Max Magnitude | 6 |
rs80357623, also known as c.5030_5034delCTAAT, 5154del5, c.5035_5039delCTAAT and p.Leu1679_Ile1680?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80357623(-;-) |
Alt | rs80357623(-;-) |
Reference | Rs80357623(CTAAT;CTAAT) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41219660_41219664delATTAG |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000031205.6, RCV000048742.3, RCV000483893.1, |