rs80357910
From SNPedia
Merged into | rs80357877 |
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;AGGAAGATACT) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(AGGAAGATACT;AGGAAGATACT) | 0 | common/normal |
(GAAGATACTAG;GAAGATACTAG) | 0 | common in clinvar |
Make rs80357910(-;-) |
Reference | GRCh38 38.1/142 |
Chromosome | 17 |
Position | 43092042 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357910 |
dbSNP (classic) | rs80357910 |
ClinGen | rs80357910 |
ebi | rs80357910 |
HLI | rs80357910 |
Exac | rs80357910 |
Gnomad | rs80357910 |
Varsome | rs80357910 |
LitVar | rs80357910 |
Map | rs80357910 |
PheGenI | rs80357910 |
Biobank | rs80357910 |
1000 genomes | rs80357910 |
hgdp | rs80357910 |
ensembl | rs80357910 |
geneview | rs80357910 |
scholar | rs80357910 |
rs80357910 | |
pharmgkb | rs80357910 |
gwascentral | rs80357910 |
openSNP | rs80357910 |
23andMe | rs80357910 |
SNPshot | rs80357910 |
SNPdbe | rs80357910 |
MSV3d | rs80357910 |
GWAS Ctlg | rs80357910 |
Status | Merged into rs80357877 |
Max Magnitude | 6 |
rs80357910, also known as 3598del11, c.3479_3489delAGGAAGATACT and p.Lys1160_Thr1163?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs80357910(GAAGATACTAG;GAAGATACTAG) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41244057_41244067delCTAGTATCTTC |
CLNSRC | Breast Cancer Information Core (BRCA1) Inc. OMIM Allelic Variant |
CLNACC | RCV000019254.14, RCV000048211.5, RCV000131815.4, RCV000159917.2, |