rs80357919
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;CTCA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(CTCA;CTCA) | 0 | common in clinvar |
Make rs80357919(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43094685 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357919 |
dbSNP (classic) | rs80357919 |
ClinGen | rs80357919 |
ebi | rs80357919 |
HLI | rs80357919 |
Exac | rs80357919 |
Gnomad | rs80357919 |
Varsome | rs80357919 |
LitVar | rs80357919 |
Map | rs80357919 |
PheGenI | rs80357919 |
Biobank | rs80357919 |
1000 genomes | rs80357919 |
hgdp | rs80357919 |
ensembl | rs80357919 |
geneview | rs80357919 |
scholar | rs80357919 |
rs80357919 | |
pharmgkb | rs80357919 |
gwascentral | rs80357919 |
openSNP | rs80357919 |
23andMe | rs80357919 |
SNPshot | rs80357919 |
SNPdbe | rs80357919 |
MSV3d | rs80357919 |
GWAS Ctlg | rs80357919 |
Max Magnitude | 6 |
rs80357919, also known as 962del4, c.843_846delCTCA and p.Ser281_Ser282?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
23andMe name: i4000457
ClinVar | |
---|---|
Risk | rs80357919(-;-) |
Alt | rs80357919(-;-) |
Reference | Rs80357919(CTCA;CTCA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not specified not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not specified not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41246702_41246705delTGAG |
CLNSRC | Breast Cancer Information Core (BRCA1) OMIM Allelic Variant |
CLNACC | RCV000019253.8, RCV000049168.5, RCV000131872.2, RCV000238935.1, RCV000412670.1, |