rs80357963
From SNPedia
Merged into | rs80357868 |
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;TGTC) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(GTCT;GTCT) | 0 | common in clinvar |
(TGTC;TGTC) | 0 | common/normal |
Make rs80357963(-;-) |
Reference | GRCh38 38.1/142 |
Chromosome | 17 |
Position | 43091773 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357963 |
dbSNP (classic) | rs80357963 |
ClinGen | rs80357963 |
ebi | rs80357963 |
HLI | rs80357963 |
Exac | rs80357963 |
Gnomad | rs80357963 |
Varsome | rs80357963 |
LitVar | rs80357963 |
Map | rs80357963 |
PheGenI | rs80357963 |
Biobank | rs80357963 |
1000 genomes | rs80357963 |
hgdp | rs80357963 |
ensembl | rs80357963 |
geneview | rs80357963 |
scholar | rs80357963 |
rs80357963 | |
pharmgkb | rs80357963 |
gwascentral | rs80357963 |
openSNP | rs80357963 |
23andMe | rs80357963 |
SNPshot | rs80357963 |
SNPdbe | rs80357963 |
MSV3d | rs80357963 |
GWAS Ctlg | rs80357963 |
Status | Merged into rs80357868 |
Max Magnitude | 6 |
rs80357963, also known as 3874del4, c.3755_3758delTGTC and p.Leu1252_Ser1253?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs80357963(GTCT;GTCT) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome Familial cancer of breast |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome Familial cancer of breast |
Reversed | 1 |
HGVS | NC_000017.10:g.41243789_41243792delAGAC |
CLNSRC | Breast Cancer Information Core (BRCA1) Inc. OMIM Allelic Variant |
CLNACC | RCV000019242.14, RCV000048314.5, RCV000131810.4, RCV000167859.4, RCV000239051.1, |