rs80357975
From SNPedia
Merged into | rs80357867 |
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;GAAA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(GAAA;GAAA) | 0 | common in clinvar |
Make rs80357975(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43063346 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80357975 |
dbSNP (classic) | rs80357975 |
ClinGen | rs80357975 |
ebi | rs80357975 |
HLI | rs80357975 |
Exac | rs80357975 |
Gnomad | rs80357975 |
Varsome | rs80357975 |
LitVar | rs80357975 |
Map | rs80357975 |
PheGenI | rs80357975 |
Biobank | rs80357975 |
1000 genomes | rs80357975 |
hgdp | rs80357975 |
ensembl | rs80357975 |
geneview | rs80357975 |
scholar | rs80357975 |
rs80357975 | |
pharmgkb | rs80357975 |
gwascentral | rs80357975 |
openSNP | rs80357975 |
23andMe | rs80357975 |
SNPshot | rs80357975 |
SNPdbe | rs80357975 |
MSV3d | rs80357975 |
GWAS Ctlg | rs80357975 |
Status | Merged into rs80357867 |
Max Magnitude | 6 |
rs80357975, also known as 5296del4, c.5177_5180delGAAA and p.Arg1726_Lys1727?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | |
Alt | |
Reference | Rs80357975(GAAA;GAAA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 not provided Hereditary cancer-predisposing syndrome Hereditary breast and ovarian cancer syndrome |
Reversed | 1 |
HGVS | NC_000017.10:g.41215363_41215366delTTTC |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000031225.8, RCV000048843.5, RCV000131829.3, RCV000167855.4, |