rs80358158
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;G) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(G;G) | 0 | Normal |
(G;T) | 6 | BRCA1 variant considered pathogenic for breast cancer |
Make rs80358158(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43106534 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80358158 |
dbSNP (classic) | rs80358158 |
ClinGen | rs80358158 |
ebi | rs80358158 |
HLI | rs80358158 |
Exac | rs80358158 |
Gnomad | rs80358158 |
Varsome | rs80358158 |
LitVar | rs80358158 |
Map | rs80358158 |
PheGenI | rs80358158 |
Biobank | rs80358158 |
1000 genomes | rs80358158 |
hgdp | rs80358158 |
ensembl | rs80358158 |
geneview | rs80358158 |
scholar | rs80358158 |
rs80358158 | |
pharmgkb | rs80358158 |
gwascentral | rs80358158 |
openSNP | rs80358158 |
23andMe | rs80358158 |
SNPshot | rs80358158 |
SNPdbe | rs80358158 |
MSV3d | rs80358158 |
GWAS Ctlg | rs80358158 |
Max Magnitude | 6 |
rs80358158, also known as c.135-1G>T and c.135-1G>C, represents a variant in the BRCA1 gene.
Both minor alleles are considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80358158(A;A) rs80358158(C;C) rs80358158(T;T) |
Alt | rs80358158(A;A) rs80358158(C;C) rs80358158(T;T) |
Reference | Rs80358158(G;G) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Hereditary breast and ovarian cancer syndrome Hereditary cancer-predisposing syndrome not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41258551C>A; NC_000017.10:g.41258551C>G; NC_000017.10:g.41258551C>T |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000030985.5, RCV000047435.3, RCV000131843.2, RCV000236913.2, RCV000047434.3, RCV000111858.1, RCV000235787.2, |