rs80359187
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;G) | 6 | BRCA2 variant considered pathogenic for breast cancer |
(G;G) | 0 | common in clinvar |
(G;T) | 6 | BRCA2 variant considered pathogenic for breast cancer |
Make rs80359187(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 32380116 |
Gene | BRCA2 |
is a | snp |
is | mentioned by |
dbSNP | rs80359187 |
dbSNP (classic) | rs80359187 |
ClinGen | rs80359187 |
ebi | rs80359187 |
HLI | rs80359187 |
Exac | rs80359187 |
Gnomad | rs80359187 |
Varsome | rs80359187 |
LitVar | rs80359187 |
Map | rs80359187 |
PheGenI | rs80359187 |
Biobank | rs80359187 |
1000 genomes | rs80359187 |
hgdp | rs80359187 |
ensembl | rs80359187 |
geneview | rs80359187 |
scholar | rs80359187 |
rs80359187 | |
pharmgkb | rs80359187 |
gwascentral | rs80359187 |
openSNP | rs80359187 |
23andMe | rs80359187 |
SNPshot | rs80359187 |
SNPdbe | rs80359187 |
MSV3d | rs80359187 |
GWAS Ctlg | rs80359187 |
Max Magnitude | 6 |
aka c.9227G>A (p.Gly3076Glu) and also c.9227G>T (p.Gly3076Val)
Both are classified as a BRCA2 gene pathogenic mutations for breast cancer based on likelihood cited in ClinVar and in [PMID 29394989]
ClinVar | |
---|---|
Risk | rs80359187(A;A) rs80359187(T;T) |
Alt | rs80359187(A;A) rs80359187(T;T) |
Reference | Rs80359187(G;G) |
Significance | Probable-Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer Hereditary cancer-predisposing syndrome not provided Hereditary breast and ovarian cancer syndrome |
Variation | info |
Gene | BRCA2 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 2 Hereditary cancer-predisposing syndrome not provided Hereditary breast and ovarian cancer syndrome |
Reversed | 0 |
HGVS | NC_000013.10:g.32954253G>A; NC_000013.10:g.32954253G>T |
CLNSRC | ClinVar Ambry Genetics |
CLNACC | RCV000045751.2, RCV000114069.1, RCV000216816.1, RCV000221088.2, RCV000114070.2, RCV000130070.2, RCV000472340.1, |