rs80359872
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(-;CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA) | 6 | BRCA1 variant considered pathogenic for breast cancer |
(CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA;CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA) | 0 | Normal |
Make rs80359872(-;-) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43094516 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80359872 |
dbSNP (classic) | rs80359872 |
ClinGen | rs80359872 |
ebi | rs80359872 |
HLI | rs80359872 |
Exac | rs80359872 |
Gnomad | rs80359872 |
Varsome | rs80359872 |
LitVar | rs80359872 |
Map | rs80359872 |
PheGenI | rs80359872 |
Biobank | rs80359872 |
1000 genomes | rs80359872 |
hgdp | rs80359872 |
ensembl | rs80359872 |
geneview | rs80359872 |
scholar | rs80359872 |
rs80359872 | |
pharmgkb | rs80359872 |
gwascentral | rs80359872 |
openSNP | rs80359872 |
23andMe | rs80359872 |
SNPshot | rs80359872 |
SNPdbe | rs80359872 |
MSV3d | rs80359872 |
GWAS Ctlg | rs80359872 |
Max Magnitude | 6 |
rs80359872, also known as 1071del64, c.952_1015del and p.His318_Lys339?fs, is a variant in the BRCA1 gene considered pathogenic for breast cancer in ClinVar.
ClinVar | |
---|---|
Risk | rs80359872(-;-) |
Alt | rs80359872(-;-) |
Reference | Rs80359872(CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA;CATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGACTCCCAGCACAGAAAAAA) |
Significance | Pathogenic |
Disease | Breast-ovarian cancer Familial cancer of breast |
Variation | info |
Gene | BRCA1 |
CLNDBN | Breast-ovarian cancer, familial 1 Familial cancer of breast |
Reversed | 1 |
HGVS | NC_000017.10:g.41246533_41246596del64 |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000031291.5, RCV000049201.2, |