rs9005
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common in complete genomics |
| Make rs9005(A;A) |
| Make rs9005(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 113133835 |
| Gene | IL1RN |
| is a | snp |
| is | mentioned by |
| dbSNP | rs9005 |
| dbSNP (classic) | rs9005 |
| ClinGen | rs9005 |
| ebi | rs9005 |
| HLI | rs9005 |
| Exac | rs9005 |
| Gnomad | rs9005 |
| Varsome | rs9005 |
| LitVar | rs9005 |
| Map | rs9005 |
| PheGenI | rs9005 |
| Biobank | rs9005 |
| 1000 genomes | rs9005 |
| hgdp | rs9005 |
| ensembl | rs9005 |
| geneview | rs9005 |
| scholar | rs9005 |
| rs9005 | |
| pharmgkb | rs9005 |
| gwascentral | rs9005 |
| openSNP | rs9005 |
| 23andMe | rs9005 |
| SNPshot | rs9005 |
| SNPdbe | rs9005 |
| MSV3d | rs9005 |
| GWAS Ctlg | rs9005 |
| GMAF | 0.3012 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 19934104
] Radiographic severity of knee osteoarthritis is conditional on Interleukin 1 Receptor Antagonist gene variations.
[PMID 20353565] Allelic variants of IL1R1 gene associate with severe hand osteoarthritis.
[PMID 21146623] Large-scale meta-analysis of interleukin-1 beta and interleukin-1 receptor antagonist polymorphisms on risk of radiographic hip and knee osteoarthritis and severity of knee osteoarthritis.
[PMID 23602982] IL-1 receptor antagonist gene as a predictive biomarker of progression of knee osteoarthritis in a population cohort
| ClinVar | |
|---|---|
| Risk | rs9005(A;A) |
| Alt | rs9005(A;A) |
| Reference | Rs9005(G;G) |
| Significance | Non-pathogenic |
| Disease | Interleukin 1 receptor antagonist deficiency |
| Variation | info |
| Gene | IL1RN |
| CLNDBN | Interleukin 1 receptor antagonist deficiency |
| Reversed | 0 |
| HGVS | NC_000002.11:g.113891412G>A |
| CLNSRC | |
| CLNACC | RCV000355397.1, |
