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MTHFR

From SNPedia

is agene
is mentioned by
Full namemethylenetetrahydrofolate reductase (NAD(P)H)
EntrezGene4524
PheGenI4524
VariationViewer4524
ClinVarMTHFR
dbSNP4524
SADR4524
HugeNav4524
wikipediaMTHFR
googleMTHFR
gopubmedMTHFR
EVSMTHFR
HEFalMpMTHFR
23andMeMTHFR
UniProtP42898
EnsemblENSG00000177000
OMIM607093
EVSMTHFR
# SNPs72
 Max MagnitudeChromosome positionSummary
Rs1212154311,794,614
Rs121434294011,800,251
Rs121434295011,801,166
Rs121434296011,794,766
Rs121434297011,795,161
Rs13306560011,806,126
Rs1330656111,805,747
Rs138189536011,802,981
Rs147257424011,801,299
Rs147641311,792,243
Rs153751411,788,011
Rs1703739011,800,786
Rs17037396011,801,990
Rs17367504011,802,721
Rs17375901011,792,459
Rs1742151111,797,731
Rs18011312.511,794,419
Rs1801133311,796,321Folic acid processing; homocysteine levels
Rs200100285011,796,313
Rs200137991011,794,443
Rs2066462011,794,839
Rs2066470011,803,000
Rs2274976011,790,870
Rs267606886011,795,114
Rs267606887011,795,158
Rs367585605011,794,385
Rs373398993011,796,219
Rs373796411,806,987
Rs3737965011,806,394
Rs45590836011,791,216
Rs484604811,786,195
Rs484604911,790,308
Rs4846051011,794,400
Rs5430161860
Rs5741326700
Rs5951431011,796,321
Rs746353274011,796,341
Rs747846362011,791,206
Rs749765738011,792,276
Rs753331511,800,626
Rs758206023011,790,843
Rs763539350011,802,915
Rs768434408011,790,682
Rs769381688011,801,257
Rs776483190011,802,980
Rs777661576011,790,916
Rs780014899011,794,540
Rs7862040050
Rs7862040070
Rs7862040090
... further results

The MTHFR gene encodes the vitamin-dependent enzyme, methylenetetrahydrofolate reductase. Several conditions or defects caused by functionally impaired forms of the MTHFR protein can be improved through dietary supplementation by folate.

There are 3 common SNPs giving rise to MTHFR alleles:

gs192 and gs193 look at variation in this gene

It is likely that there are numerous other variations that are much rarer. When the MTHFR genes of 564 individuals of diverse ethnicities were fully sequenced, in addition to the 3 common alleles mentioned above, 11 other nonsynonymous changes were found, each with a frequency under 1%. Four of these 11 rarer alleles affected enzyme function (as did A222V) based on tests in yeast, most of which could be fixed with higher folate supplementation (in yeast; this is not yet tested in humans). Since all five impaired alleles map to the N-terminal catalytic domain of the enzyme, it seems likely that additional SNPs causing nonsynonymous changes in this region could have similar effects.10.1073/pnas.0802813105


SNP rs1801133, A222V, is not thought to be a major risk factor for neural tube defects [PMID 17035141] except in certain populations. For example, Dutch and Irish populations indicate an increased risk for (T;T) carriers [PMID 10090889], but this same genotype (ie carriers of the thermolabile T allele) appears to have a protective effect in an Italian population studied [PMID 12111380].

[PMID 16672082] a SNP in MTHFR which affects Neural-tube defects (Birth defects)