rs11169552
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs11169552(C;C) |
| Make rs11169552(C;T) |
| Make rs11169552(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 12 |
| Position | 50761880 |
| Gene | ATF1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs11169552 |
| dbSNP (classic) | rs11169552 |
| ClinGen | rs11169552 |
| ebi | rs11169552 |
| HLI | rs11169552 |
| Exac | rs11169552 |
| Gnomad | rs11169552 |
| Varsome | rs11169552 |
| LitVar | rs11169552 |
| Map | rs11169552 |
| PheGenI | rs11169552 |
| Biobank | rs11169552 |
| 1000 genomes | rs11169552 |
| hgdp | rs11169552 |
| ensembl | rs11169552 |
| geneview | rs11169552 |
| scholar | rs11169552 |
| rs11169552 | |
| pharmgkb | rs11169552 |
| gwascentral | rs11169552 |
| openSNP | rs11169552 |
| 23andMe | rs11169552 |
| SNPshot | rs11169552 |
| SNPdbe | rs11169552 |
| MSV3d | rs11169552 |
| GWAS Ctlg | rs11169552 |
| GMAF | 0.2369 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20972440 ]
|
| Trait | |
| Title | Meta-analysis of three genome-wide association studies identifies susceptibility loci for colorectal cancer at 1q41, 3q26.2, 12q13.13 and 20q13.33 |
| Risk Allele | C |
| P-val | 2E-10 |
| Odds Ratio | 1.0900 [1.05-1.11] |
[PMID 22076443] Refinement of the associations between risk of colorectal cancer and polymorphisms on chromosomes 1q41 and 12q13.13
[PMID 22045029] Relationship between 16 susceptibility loci and colorectal cancer phenotype in 3146 patients.
[PMID 22999960] Much of the genetic risk of colorectal cancer is likely to be mediated through susceptibility to adenomas.
