rs1169313
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs1169313(C;C) |
| Make rs1169313(C;T) |
| Make rs1169313(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 12 |
| Position | 121004867 |
| Gene | C12orf43 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs1169313 |
| dbSNP (classic) | rs1169313 |
| ClinGen | rs1169313 |
| ebi | rs1169313 |
| HLI | rs1169313 |
| Exac | rs1169313 |
| Gnomad | rs1169313 |
| Varsome | rs1169313 |
| LitVar | rs1169313 |
| Map | rs1169313 |
| PheGenI | rs1169313 |
| Biobank | rs1169313 |
| 1000 genomes | rs1169313 |
| hgdp | rs1169313 |
| ensembl | rs1169313 |
| geneview | rs1169313 |
| scholar | rs1169313 |
| rs1169313 | |
| pharmgkb | rs1169313 |
| gwascentral | rs1169313 |
| openSNP | rs1169313 |
| 23andMe | rs1169313 |
| SNPshot | rs1169313 |
| SNPdbe | rs1169313 |
| MSV3d | rs1169313 |
| GWAS Ctlg | rs1169313 |
| GMAF | 0.3682 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 18940312 ]
|
| Trait | Plasma levels of liver enzymes |
| Title | Population-based genome-wide association studies reveal six loci influencing plasma levels of liver enzymes |
| Risk Allele | C |
| P-val | 2E-10 |
| Odds Ratio | 0.01 [0.003-0.007] U/L decrease |
| OMIM | 612366 |
| Desc | GAMMA GLUTAMYLTRANSFERASE, PLASMA LEVEL OF, QUANTITATIVE TRAIT LOCUS |
| Variant | |
| Related | also |
[PMID 18439552] Polymorphisms of the HNF1A gene encoding hepatocyte nuclear factor-1 alpha are associated with C-reactive protein.
[PMID 19198612] New susceptibility locus for coronary artery disease on chromosome 3q22.3.
[PMID 19474294] Potential etiologic and functional implications of genome-wide association loci for human diseases and traits.
