rs17309827
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs17309827(G;G) |
| Make rs17309827(G;T) |
| Make rs17309827(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 3433084 |
| Gene | SLC22A23 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17309827 |
| dbSNP (classic) | rs17309827 |
| ClinGen | rs17309827 |
| ebi | rs17309827 |
| HLI | rs17309827 |
| Exac | rs17309827 |
| Gnomad | rs17309827 |
| Varsome | rs17309827 |
| LitVar | rs17309827 |
| Map | rs17309827 |
| PheGenI | rs17309827 |
| Biobank | rs17309827 |
| 1000 genomes | rs17309827 |
| hgdp | rs17309827 |
| ensembl | rs17309827 |
| geneview | rs17309827 |
| scholar | rs17309827 |
| rs17309827 | |
| pharmgkb | rs17309827 |
| gwascentral | rs17309827 |
| openSNP | rs17309827 |
| 23andMe | rs17309827 |
| SNPshot | rs17309827 |
| SNPdbe | rs17309827 |
| MSV3d | rs17309827 |
| GWAS Ctlg | rs17309827 |
| GMAF | 0.3306 |
| Max Magnitude | 0 |
| ? | (G;G) (G;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 21102463 ]
|
| Trait | |
| Title | Genome-wide meta-analysis increases to 71 the number of confirmed Crohn's disease susceptibility loci |
| Risk Allele | T |
| P-val | 7E-9 |
| Odds Ratio | 1.1000 [1.05-1.16] |
[PMID 18587394] Genome-wide association defines more than 30 distinct susceptibility loci for Crohn's disease.
[PMID 19068216] Investigation of Crohn's disease risk loci in ulcerative colitis further defines their molecular relationship.
[PMID 21304977] An investigation of genome-wide studies reported susceptibility loci for ulcerative colitis shows limited replication in north Indians.
