rs2051090
From SNPedia
Orientation | minus |
Stabilized | minus |
Make rs2051090(C;C) |
Make rs2051090(C;T) |
Make rs2051090(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 13 |
Position | 35880056 |
Gene | DCLK1, LOC105370163 |
is a | snp |
is | mentioned by |
dbSNP | rs2051090 |
dbSNP (classic) | rs2051090 |
ClinGen | rs2051090 |
ebi | rs2051090 |
HLI | rs2051090 |
Exac | rs2051090 |
Gnomad | rs2051090 |
Varsome | rs2051090 |
LitVar | rs2051090 |
Map | rs2051090 |
PheGenI | rs2051090 |
Biobank | rs2051090 |
1000 genomes | rs2051090 |
hgdp | rs2051090 |
ensembl | rs2051090 |
geneview | rs2051090 |
scholar | rs2051090 |
rs2051090 | |
pharmgkb | rs2051090 |
gwascentral | rs2051090 |
openSNP | rs2051090 |
23andMe | rs2051090 |
SNPshot | rs2051090 |
SNPdbe | rs2051090 |
MSV3d | rs2051090 |
GWAS Ctlg | rs2051090 |
GMAF | 0.3756 |
Max Magnitude | 0 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
GWAS snp | |
---|---|
PMID | [PMID 23535911] |
Trait | Non-alcoholic fatty liver disease |
Title | Genome-wide scan revealed that polymorphisms in the PNPLA3, SAMM50, and PARVB genes are associated with development and progression of nonalcoholic fatty liver disease in Japan. |
Risk Allele | G |
P-val | 7E-6 |
Odds Ratio | 1.19 [0.88-1.62] |
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 13
- Has genotype
- Has population
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d