rs2382817
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs2382817(A;A) |
| Make rs2382817(A;C) |
| Make rs2382817(C;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 2 |
| Position | 218286495 |
| Gene | PNKD, TMBIM1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2382817 |
| dbSNP (classic) | rs2382817 |
| ClinGen | rs2382817 |
| ebi | rs2382817 |
| HLI | rs2382817 |
| Exac | rs2382817 |
| Gnomad | rs2382817 |
| Varsome | rs2382817 |
| LitVar | rs2382817 |
| Map | rs2382817 |
| PheGenI | rs2382817 |
| Biobank | rs2382817 |
| 1000 genomes | rs2382817 |
| hgdp | rs2382817 |
| ensembl | rs2382817 |
| geneview | rs2382817 |
| scholar | rs2382817 |
| rs2382817 | |
| pharmgkb | rs2382817 |
| gwascentral | rs2382817 |
| openSNP | rs2382817 |
| 23andMe | rs2382817 |
| SNPshot | rs2382817 |
| SNPdbe | rs2382817 |
| MSV3d | rs2382817 |
| GWAS Ctlg | rs2382817 |
| GMAF | 0.3733 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23128233 ]
|
| Trait | Inflammatory bowel disease |
| Title | Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease. |
| Risk Allele | A |
| P-val | 4E-12 |
| Odds Ratio | 1.07 [1.042-1.104] |
[PMID 27005424] Variation at 2q35 (PNKD and TMBIM1) influences colorectal cancer risk and identifies a pleiotropic effect with inflammatory bowel disease.
