rs2516839
| Orientation | minus |
| Stabilized | minus |
| Make rs2516839(A;A) |
| Make rs2516839(A;G) |
| Make rs2516839(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 1 |
| Position | 161043331 |
| Gene | USF1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2516839 |
| dbSNP (classic) | rs2516839 |
| ClinGen | rs2516839 |
| ebi | rs2516839 |
| HLI | rs2516839 |
| Exac | rs2516839 |
| Gnomad | rs2516839 |
| Varsome | rs2516839 |
| LitVar | rs2516839 |
| Map | rs2516839 |
| PheGenI | rs2516839 |
| Biobank | rs2516839 |
| 1000 genomes | rs2516839 |
| hgdp | rs2516839 |
| ensembl | rs2516839 |
| geneview | rs2516839 |
| scholar | rs2516839 |
| rs2516839 | |
| pharmgkb | rs2516839 |
| gwascentral | rs2516839 |
| openSNP | rs2516839 |
| 23andMe | rs2516839 |
| SNPshot | rs2516839 |
| SNPdbe | rs2516839 |
| MSV3d | rs2516839 |
| GWAS Ctlg | rs2516839 |
| GMAF | 0.4302 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
[PMID 18276913
] carriers of risk alleles of rs2516839 also showed a 2-fold risk for sudden cardiac death (genotype TT versus CC; OR 2.10, 95% CI 1.17 to 3.75, P=0.04)
[PMID 15657872] Association testing in a linked region using large pedigrees.
[PMID 16132950] The linkage and association of the gene encoding upstream stimulatory factor 1 with type 2 diabetes and metabolic syndrome in the Chinese population.
[PMID 16699592] Risk alleles of USF1 gene predict cardiovascular disease of women in two prospective studies.
[PMID 18303204] Body mass index is associated with USF1 haplotype in Korean premenopausal women.
[PMID 19910639] Genetic association and interaction analysis of USF1 and APOA5 on lipid levels and atherosclerosis.
[PMID 23271305] Association analysis of USF1 gene polymorphisms and total unstable carotid plaque area in atherosclerotic stroke patients
[PMID 25480412] Significant association between upstream transcription factor 1 rs2516839 polymorphism and hepatocellular carcinoma risk: a case-control study
[PMID 26052935] Association between single nucleotide polymorphisms of upstream transcription factor 1 (USF1) and susceptibility to papillary thyroid cancer
[PMID 26068452] The rs2516839 Polymorphism of the USF1 Gene May Modulate Serum Triglyceride Levels in Response to Cigarette Smoking
[PMID 24722012] Upstream Transcription Factor 1 (USF1) allelic variants regulate lipoprotein metabolism in women and USF1 expression in atherosclerotic plaque
[PMID 29598907] Upstream Stimulating Factor 1 (USF-1) Gene Polymorphisms and the Risk, Symptoms, and Outcome of Pediatric Ischemic Stroke.
