rs2671692
Orientation | plus |
Stabilized | plus |
Make rs2671692(A;A) |
Make rs2671692(A;G) |
Make rs2671692(G;G) |
Reference | GRCh38 38.1/142 |
Chromosome | 10 |
Position | 48889774 |
Gene | LRRC18, WDFY4 |
is a | snp |
is | mentioned by |
dbSNP | rs2671692 |
dbSNP (classic) | rs2671692 |
ClinGen | rs2671692 |
ebi | rs2671692 |
HLI | rs2671692 |
Exac | rs2671692 |
Gnomad | rs2671692 |
Varsome | rs2671692 |
LitVar | rs2671692 |
Map | rs2671692 |
PheGenI | rs2671692 |
Biobank | rs2671692 |
1000 genomes | rs2671692 |
hgdp | rs2671692 |
ensembl | rs2671692 |
geneview | rs2671692 |
scholar | rs2671692 |
rs2671692 | |
pharmgkb | rs2671692 |
gwascentral | rs2671692 |
openSNP | rs2671692 |
23andMe | rs2671692 |
SNPshot | rs2671692 |
SNPdbe | rs2671692 |
MSV3d | rs2671692 |
GWAS Ctlg | rs2671692 |
GMAF | 0.4706 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
One of 42 more SNPs associated with rheumatoid arthritis based on a meta-analysis of 30,000 patients, most with odds ratios of 1.01 - 1.2. 10.1038/nature12873
[PMID 20017967] Genome-wide association analyses of North American Rheumatoid Arthritis Consortium and Framingham Heart Study data utilizing genome-wide linkage results.
[PMID 20017985] Adjusting for HLA-DRbeta1 in a genome-wide association analysis of rheumatoid arthritis and related biomarkers.
[PMID 20018006] Case-control genome-wide association study of rheumatoid arthritis from Genetic Analysis Workshop 16 using penalized orthogonal-components regression-linear discriminant analysis.
[PMID 20018053] A genome-wide association scan for rheumatoid arthritis data by Hotelling's T2 tests.
[PMID 20169177] Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus.
GWAS snp | |
---|---|
PMID | [PMID 24390342] |
Trait | Rheumatoid arthritis |
Title | Genetics of rheumatoid arthritis contributes to biology and drug discovery. |
Risk Allele | A |
P-val | 3E-9 |
Odds Ratio | 1.07 [1.05-1.10] |
- Is a snp
- In dbSNP
- SNPs on chromosome 10
- Has genotype
- Has population
- Uses doi
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip NatGeo2
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d