rs8050910
From SNPedia
Orientation | plus |
Stabilized | plus |
Make rs8050910(G;G) |
Make rs8050910(G;T) |
Make rs8050910(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 16 |
Position | 85105567 |
Gene | FAM92B |
is a | snp |
is | mentioned by |
dbSNP | rs8050910 |
dbSNP (classic) | rs8050910 |
ClinGen | rs8050910 |
ebi | rs8050910 |
HLI | rs8050910 |
Exac | rs8050910 |
Gnomad | rs8050910 |
Varsome | rs8050910 |
LitVar | rs8050910 |
Map | rs8050910 |
PheGenI | rs8050910 |
Biobank | rs8050910 |
1000 genomes | rs8050910 |
hgdp | rs8050910 |
ensembl | rs8050910 |
geneview | rs8050910 |
scholar | rs8050910 |
rs8050910 | |
pharmgkb | rs8050910 |
gwascentral | rs8050910 |
openSNP | rs8050910 |
23andMe | rs8050910 |
SNPshot | rs8050910 |
SNPdbe | rs8050910 |
MSV3d | rs8050910 |
GWAS Ctlg | rs8050910 |
GMAF | 0.4348 |
Max Magnitude | 0 |
? | (G;G) (G;T) (T;T) | 28 |
---|---|---|
|
Rs8050910 | |
---|---|
PubMed | [PMID 17435756] |
Affy Probeset | SNP_A-2197527 |
Affy Orientation | reverse |
On GW 5.0 | 1 |
Alleles A/B | A/C |
Ancestral | T |
Population | EU |
Allele | T |
Case Freq. | 0.61 |
Control Freq. | 0.54 |
Odds Ratio Het | |
Odds Ratio Hom | |
Odds Ratio All | 1.19 |
Disease | Crohn's disease (CD) |
rs8050910 increases susceptibility to Crohn's disease 1.19 times for carriers of the T allele [PMID 17435756]
[PMID 19262523] rs224136 on chromosome 10q21.1 and variants in PHOX2B, NCF4, and FAM92B are not major genetic risk factors for susceptibility to Crohn's disease in the German population
[PMID 17068223] A genome-wide association study identifies IL23R as an inflammatory bowel disease gene.
[PMID 18580884] Confirmation of association of IRGM and NCF4 with ileal Crohn's disease in a population-based cohort.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 16
- Has genotype
- Has population
- Has Report GE
- Uses omim
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Affy500k
- On chip Ancestry v2
- On chip FTDNA2
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip Ancestry v2c
- On chip Ancestry v2d