rs9402686
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs9402686(A;A) |
| Make rs9402686(A;G) |
| Make rs9402686(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 135106679 |
| Gene | LOC105378010 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs9402686 |
| dbSNP (classic) | rs9402686 |
| ClinGen | rs9402686 |
| ebi | rs9402686 |
| HLI | rs9402686 |
| Exac | rs9402686 |
| Gnomad | rs9402686 |
| Varsome | rs9402686 |
| LitVar | rs9402686 |
| Map | rs9402686 |
| PheGenI | rs9402686 |
| Biobank | rs9402686 |
| 1000 genomes | rs9402686 |
| hgdp | rs9402686 |
| ensembl | rs9402686 |
| geneview | rs9402686 |
| scholar | rs9402686 |
| rs9402686 | |
| pharmgkb | rs9402686 |
| gwascentral | rs9402686 |
| openSNP | rs9402686 |
| 23andMe | rs9402686 |
| SNPshot | rs9402686 |
| SNPdbe | rs9402686 |
| MSV3d | rs9402686 |
| GWAS Ctlg | rs9402686 |
| GMAF | 0.2218 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 19820697 ]
|
| Trait | Hematological parameters |
| Title | A genome-wide meta-analysis identifies 22 loci associated with eight hematological parameters in the HaemGen consortium |
| Risk Allele | A |
| P-val | 7E-42 |
| Odds Ratio | 0.82 [0.70-0.94] fl increase |
[PMID 17592125] Intergenic variants of HBS1L-MYB are responsible for a major quantitative trait locus on chromosome 6q23 influencing fetal hemoglobin levels in adults.
[PMID 19148297] Genetic variation on chromosome 6 influences F cell levels in healthy individuals of African descent and HbF levels in sickle cell patients.
[PMID 20401335] Sickle Cell Disease in the Post Genomic Era: A Monogenic Disease with a Polygenic Phenotype.
