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rs1551398

From SNPedia

Orientationminus
Stabilizedminus
Make rs1551398(C;C)
Make rs1551398(C;T)
Make rs1551398(T;T)
ReferenceGRCh38 38.1/141
Chromosome8
Position125527809
is asnp
is mentioned by
dbSNPrs1551398
ebirs1551398
HLIrs1551398
Exacrs1551398
Varsomers1551398
Maprs1551398
PheGenIrs1551398
hapmaprs1551398
1000 genomesrs1551398
hgdprs1551398
ensemblrs1551398
gopubmedrs1551398
geneviewrs1551398
scholarrs1551398
googlers1551398
pharmgkbrs1551398
gwascentralrs1551398
openSNPrs1551398
23andMers1551398
23andMe allrs1551398
SNP Nexus

SNPshotrs1551398
SNPdbers1551398
MSV3drs1551398
GWAS Ctlgrs1551398
GMAF0.4311
Max Magnitude
? (C;C) (C;T) (T;T) 28
GWAS snp
PMID [PMID 18587394OA-icon.png]
Trait Crohn's disease
Title Genome-wide assocation defines more than 30 distinct susceptibility loci for Crohn's disease
Risk Allele A
P-val 5.0000000000000001E-9
Odds Ratio 1.08 [NR]

DeCode reports that rs1551398 is associated with susceptibility to Crohn's disease. [PMID 18587394OA-icon.png]


[PMID 19068216OA-icon.png] Investigation of Crohn's disease risk loci in ulcerative colitis further defines their molecular relationship.


[PMID 21304977OA-icon.png] An investigation of genome-wide studies reported susceptibility loci for ulcerative colitis shows limited replication in north Indians.


GET Evidence
rs1551398
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.390625
summary



[PMID 23543094OA-icon.png] Testing for associations between loci and environmental gradients using latent factor mixed models.