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rs5771069

From SNPedia

Orientationplus
Stabilizedplus
Make rs5771069(A;A)
Make rs5771069(A;G)
Make rs5771069(G;G)
ReferenceGRCh38 38.1/141
Chromosome22
Position49997051
GeneIL17REL
is asnp
is mentioned by
dbSNPrs5771069
ebirs5771069
HLIrs5771069
Exacrs5771069
Varsomers5771069
Maprs5771069
PheGenIrs5771069
hapmaprs5771069
1000 genomesrs5771069
hgdprs5771069
ensemblrs5771069
gopubmedrs5771069
geneviewrs5771069
scholarrs5771069
googlers5771069
pharmgkbrs5771069
gwascentralrs5771069
openSNPrs5771069
23andMers5771069
23andMe allrs5771069
SNP Nexus

SNPshotrs5771069
SNPdbers5771069
MSV3drs5771069
GWAS Ctlgrs5771069
GMAF0.4435
Max Magnitude
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 20228798]
Trait Ulcerative colitis
Title Genome-wide association study for ulcerative colitis identifies risk loci at 7q22 and 22q13 (IL17REL)
Risk Allele G
P-val 4E-8
Odds Ratio 1.17 [1.11-1.25]
OMIM266600
Desc
Variant
Relatedalso
GWAS snp
PMID [PMID 21297633OA-icon.png]
Trait
Title Meta-analysis identifies 29 additional ulcerative colitis risk loci, increasing the number of confirmed associations to 47
Risk Allele G
P-val 2E-7
Odds Ratio 1.1100 [1.07-1.16]


[PMID 21995314OA-icon.png] Assessment of heterogeneity between European Populations: a Baltic and Danish replication case-control study of SNPs from a recent European ulcerative colitis genome wide association study


GET Evidence
IL17REL-L333P
aa_change Leu333Pro
aa_change_short L333P
impact not reviewed
qualified_impact Insufficiently evaluated not reviewed
overall_frequency 0.538109
summary