rs16853571
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (A;A) | 0 | common in complete genomics |
| Make rs16853571(A;C) |
| Make rs16853571(C;C) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 4 |
| Position | 41751113 |
| Gene | LOC105374425 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs16853571 |
| dbSNP (classic) | rs16853571 |
| ClinGen | rs16853571 |
| ebi | rs16853571 |
| HLI | rs16853571 |
| Exac | rs16853571 |
| Gnomad | rs16853571 |
| Varsome | rs16853571 |
| LitVar | rs16853571 |
| Map | rs16853571 |
| PheGenI | rs16853571 |
| Biobank | rs16853571 |
| 1000 genomes | rs16853571 |
| hgdp | rs16853571 |
| ensembl | rs16853571 |
| geneview | rs16853571 |
| scholar | rs16853571 |
| rs16853571 | |
| pharmgkb | rs16853571 |
| gwascentral | rs16853571 |
| openSNP | rs16853571 |
| 23andMe | rs16853571 |
| SNPshot | rs16853571 |
| SNPdbe | rs16853571 |
| MSV3d | rs16853571 |
| GWAS Ctlg | rs16853571 |
| GMAF | 0.06887 |
| Max Magnitude | 0 |
| ? | (A;A) (A;C) (C;C) | 28 |
|---|---|---|
|
| ||
rs16853571 increases susceptibility to Crohn's disease 1.45 times for carriers of the A allele [PMID 17435756
]
[PMID 19262523] rs224136 on chromosome 10q21.1 and variants in PHOX2B, NCF4, and FAM92B are not major genetic risk factors for susceptibility to Crohn's disease in the German population
[PMID 21206965] IL23R, NOD2/CARD15, ATG16L1 and PHOX2B polymorphisms in a group of patients with Crohn's disease and correlation with sub-phenotypes
[PMID 17068223] A genome-wide association study identifies IL23R as an inflammatory bowel disease gene.
[PMID 18580884] Confirmation of association of IRGM and NCF4 with ileal Crohn's disease in a population-based cohort.
