rs2697962
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 2 | Increased risk of developing Parkinson's Disease |
(A;G) | 1.5 | Slightly increased risk of developing Parkinson's Disease |
(C;C) | 0 | |
(G;G) | 1 | Normal risk of developing Parkinson's Disease |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 13824497 |
Gene | PRDM2 |
is a | snp |
is | mentioned by |
dbSNP | rs2697962 |
dbSNP (classic) | rs2697962 |
ClinGen | rs2697962 |
ebi | rs2697962 |
HLI | rs2697962 |
Exac | rs2697962 |
Gnomad | rs2697962 |
Varsome | rs2697962 |
LitVar | rs2697962 |
Map | rs2697962 |
PheGenI | rs2697962 |
Biobank | rs2697962 |
1000 genomes | rs2697962 |
hgdp | rs2697962 |
ensembl | rs2697962 |
geneview | rs2697962 |
scholar | rs2697962 |
rs2697962 | |
pharmgkb | rs2697962 |
gwascentral | rs2697962 |
openSNP | rs2697962 |
23andMe | rs2697962 |
SNPshot | rs2697962 |
SNPdbe | rs2697962 |
MSV3d | rs2697962 |
GWAS Ctlg | rs2697962 |
GMAF | 0.1561 |
Max Magnitude | 2 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
Rs2697962 | |
---|---|
PubMed | [PMID 16252231] |
Affy Probeset | SNP_A-8401263 |
Affy Orientation | reverse |
On GW 5.0 | |
Alleles A/B | C/T |
Ancestral | A |
Population | |
Allele | A |
Case Freq. | |
Control Freq. | |
Odds Ratio Het | |
Odds Ratio Hom | |
Odds Ratio All | 1.67 |
Disease | Parkinson's disease (PKD) |
rs2697962 is in linkage disequilibrium with a polymorphism that increases susceptibility to Parkinson's disease 1.67 times for carriers of the A allele [PMID 16252231]
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 1
- Has genotype
- Has population
- Has Report GE
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip Ancestry v2c
- On chip Ancestry v2d