rs2836754
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs2836754(C;C) |
| Make rs2836754(C;T) |
| Make rs2836754(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 21 |
| Position | 38919816 |
| Gene | LOC400867 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs2836754 |
| dbSNP (classic) | rs2836754 |
| ClinGen | rs2836754 |
| ebi | rs2836754 |
| HLI | rs2836754 |
| Exac | rs2836754 |
| Gnomad | rs2836754 |
| Varsome | rs2836754 |
| LitVar | rs2836754 |
| Map | rs2836754 |
| PheGenI | rs2836754 |
| Biobank | rs2836754 |
| 1000 genomes | rs2836754 |
| hgdp | rs2836754 |
| ensembl | rs2836754 |
| geneview | rs2836754 |
| scholar | rs2836754 |
| rs2836754 | |
| pharmgkb | rs2836754 |
| gwascentral | rs2836754 |
| openSNP | rs2836754 |
| 23andMe | rs2836754 |
| SNPshot | rs2836754 |
| SNPdbe | rs2836754 |
| MSV3d | rs2836754 |
| GWAS Ctlg | rs2836754 |
| GMAF | 0.4302 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 17554261 ]
|
| Trait | Crohn's disease |
| Title | Sequence variants in the autophagy gene IRGM and multiple other replicating loci contribute to Crohn's disease susceptibility |
| Risk Allele | |
| P-val | 4.9999999999999998E-7 |
| Odds Ratio | 1.15 [1.03-1.28] |
[PMID 18438406] Genetic determinants of ulcerative colitis include the ECM1 locus and five loci implicated in Crohn's disease.
[PMID 18853133] Gene variants influencing measures of inflammation or predisposing to autoimmune and inflammatory diseases are not associated with the risk of type 2 diabetes.
[PMID 19140132] Unbiased estimation of odds ratios: combining genomewide association scans with replication studies.
