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rs28938174

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(A;A) 0 common in clinvar
(A;T) 3 Unaffected carrier of a Smith-Lemli-Opitz syndrome mutation
Make rs28938174(T;T)
ReferenceGRCh38 38.1/141
Chromosome11
Position71442319
GeneDHCR7
is asnp
is mentioned by
dbSNPrs28938174
dbSNP (classic)rs28938174
ClinGenrs28938174
ebirs28938174
HLIrs28938174
Exacrs28938174
Gnomadrs28938174
Varsomers28938174
LitVarrs28938174
Maprs28938174
PheGenIrs28938174
Biobankrs28938174
1000 genomesrs28938174
hgdprs28938174
ensemblrs28938174
geneviewrs28938174
scholarrs28938174
googlers28938174
pharmgkbrs28938174
gwascentralrs28938174
openSNPrs28938174
23andMers28938174
SNPshotrs28938174
SNPdbers28938174
MSV3drs28938174
GWAS Ctlgrs28938174
Max Magnitude3

aka c.356A>T (p.His119Leu or H119L); note that c.356A>G (p.His119Arg) is also a known variant for rs28938174, however, it's significance is uncertain (whereas c.356A>T is pathogenic for SLO)

OMIM602858
DescSMITH-LEMLI-OPITZ SYNDROME
Variant0005
Relatedalso


ClinVar
Risk rs28938174(G;G) rs28938174(T;T)
Alt rs28938174(G;G) rs28938174(T;T)
Reference Rs28938174(A;A)
Significance Pathogenic
Disease Smith-Lemli-Opitz syndrome not provided
Variation info
Gene DHCR7
CLNDBN Smith-Lemli-Opitz syndrome not provided
Reversed 1
HGVS NC_000011.9:g.71153365T>A
CLNSRC OMIM Allelic Variant UniProtKB (protein)
CLNACC RCV000007182.6, RCV000274996.1,