rs28938174
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;T) | 3 | Unaffected carrier of a Smith-Lemli-Opitz syndrome mutation |
Make rs28938174(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 71442319 |
Gene | DHCR7 |
is a | snp |
is | mentioned by |
dbSNP | rs28938174 |
dbSNP (classic) | rs28938174 |
ClinGen | rs28938174 |
ebi | rs28938174 |
HLI | rs28938174 |
Exac | rs28938174 |
Gnomad | rs28938174 |
Varsome | rs28938174 |
LitVar | rs28938174 |
Map | rs28938174 |
PheGenI | rs28938174 |
Biobank | rs28938174 |
1000 genomes | rs28938174 |
hgdp | rs28938174 |
ensembl | rs28938174 |
geneview | rs28938174 |
scholar | rs28938174 |
rs28938174 | |
pharmgkb | rs28938174 |
gwascentral | rs28938174 |
openSNP | rs28938174 |
23andMe | rs28938174 |
SNPshot | rs28938174 |
SNPdbe | rs28938174 |
MSV3d | rs28938174 |
GWAS Ctlg | rs28938174 |
Max Magnitude | 3 |
aka c.356A>T (p.His119Leu or H119L); note that c.356A>G (p.His119Arg) is also a known variant for rs28938174, however, it's significance is uncertain (whereas c.356A>T is pathogenic for SLO)
ClinVar | |
---|---|
Risk | rs28938174(G;G) rs28938174(T;T) |
Alt | rs28938174(G;G) rs28938174(T;T) |
Reference | Rs28938174(A;A) |
Significance | Pathogenic |
Disease | Smith-Lemli-Opitz syndrome not provided |
Variation | info |
Gene | DHCR7 |
CLNDBN | Smith-Lemli-Opitz syndrome not provided |
Reversed | 1 |
HGVS | NC_000011.9:g.71153365T>A |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000007182.6, RCV000274996.1, |