rs3135363

Orientation

minus

Stabilized

minus

Make rs3135363(C;C)

Make rs3135363(C;T)

Make rs3135363(T;T)

Reference

GRCh38 38.1/141

Chromosome

6

Position

32421871

is a	snp
is	mentioned by
dbSNP	rs3135363
dbSNP (classic)	rs3135363
ClinGen	rs3135363
ebi	rs3135363
HLI	rs3135363
Exac	rs3135363
Gnomad	rs3135363
Varsome	rs3135363
LitVar	rs3135363
Map	rs3135363
PheGenI	rs3135363
Biobank	rs3135363
1000 genomes	rs3135363
hgdp	rs3135363
ensembl	rs3135363
geneview	rs3135363
scholar	rs3135363
google	rs3135363
pharmgkb	rs3135363
gwascentral	rs3135363
openSNP	rs3135363
23andMe	rs3135363
SNPshot	rs3135363
SNPdbe	rs3135363
MSV3d	rs3135363
GWAS Ctlg	rs3135363

GMAF

0.2479

Max Magnitude

0

?

(C;C) (C;T) (T;T)

28

GWAS snp
PMID	[PMID 21764829]
Trait
Title	A genome-wide association study of hepatitis B vaccine response in an Indonesian population reveals multiple independent risk variants in the HLA region.
Risk Allele
P-val	7E-22
Odds Ratio	1.5300 [1.35-1.74]

[PMID 19143810 ] Haplotype-based search for SNPs associated with differential type 1 diabetes risk among chromosomes carrying a specific HLA DRB1-DQA1-DQB1 haplotype.

[PMID 19458352 ] Primary biliary cirrhosis associated with HLA, IL12A, and IL12RB2 variants.

[PMID 20018006 ] Case-control genome-wide association study of rheumatoid arthritis from Genetic Analysis Workshop 16 using penalized orthogonal-components regression-linear discriminant analysis.

[PMID 20041220 ] Autoimmune disease classification by inverse association with SNP alleles.

GWAS snp
PMID	[PMID 23321320]
Trait	Hepatitis C induced liver cirrhosis
Title	A genome-wide association study of HCV-induced liver cirrhosis in the Japanese population identifies novel susceptibility loci at the MHC region.
Risk Allele	C
P-val	1E-10
Odds Ratio	1.37 [1.24-1.51]

GWAS snp
PMID	[PMID 24282030]
Trait	Hepatitis B vaccine response
Title	A genome-wide association study identifies polymorphisms in the HLA-DR region associated with non-response to hepatitis B vaccination in Chinese Han populations.
Risk Allele
P-val	8E-7
Odds Ratio	1.51 [1.28-1.78]