rs3804505
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common on affy axiom data |
(C;T) | ? | |
(T;T) | 2 | rare, related to myoclonic epilepsy |
Reference | GRCh38 38.1/142 |
Chromosome | 6 |
Position | 52438563 |
Gene | EFHC1 |
is a | snp |
is | mentioned by |
dbSNP | rs3804505 |
dbSNP (classic) | rs3804505 |
ClinGen | rs3804505 |
ebi | rs3804505 |
HLI | rs3804505 |
Exac | rs3804505 |
Gnomad | rs3804505 |
Varsome | rs3804505 |
LitVar | rs3804505 |
Map | rs3804505 |
PheGenI | rs3804505 |
Biobank | rs3804505 |
1000 genomes | rs3804505 |
hgdp | rs3804505 |
ensembl | rs3804505 |
geneview | rs3804505 |
scholar | rs3804505 |
rs3804505 | |
pharmgkb | rs3804505 |
gwascentral | rs3804505 |
openSNP | rs3804505 |
23andMe | rs3804505 |
SNPshot | rs3804505 |
SNPdbe | rs3804505 |
MSV3d | rs3804505 |
GWAS Ctlg | rs3804505 |
GMAF | 0.04362 |
Max Magnitude | 2 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
ClinVar | |
---|---|
Risk | rs3804505(A;A) Rs3804505(T;T) |
Alt | rs3804505(A;A) Rs3804505(T;T) |
Reference | Rs3804505(C;C) |
Significance | Other |
Disease | Myoclonic epilepsy not specified |
Variation | info |
Gene | EFHC1 |
CLNDBN | Myoclonic epilepsy, juvenile 1 not specified |
Reversed | 1 |
HGVS | NC_000006.11:g.52303361G>A |
CLNSRC | OMIM Allelic Variant UniProtKB (protein) |
CLNACC | RCV000002144.3, RCV000116950.3, |
[PMID 18823326] DNA variants in coding region of EFHC1: SNPs do not associate with juvenile myoclonic epilepsy.
Categories:
- Is a snp
- In dbSNP
- SNPs on chromosome 6
- Has genotype
- Has population
- Uses omim
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip FTDNA
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip 23andMe v5
- On chip Ancestry v2c
- On chip Ancestry v2d