rs3812111
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (T;T) | 0 | common in clinvar |
| Make rs3812111(A;A) |
| Make rs3812111(A;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 116122572 |
| Gene | COL10A1, NT5DC1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs3812111 |
| dbSNP (classic) | rs3812111 |
| ClinGen | rs3812111 |
| ebi | rs3812111 |
| HLI | rs3812111 |
| Exac | rs3812111 |
| Gnomad | rs3812111 |
| Varsome | rs3812111 |
| LitVar | rs3812111 |
| Map | rs3812111 |
| PheGenI | rs3812111 |
| Biobank | rs3812111 |
| 1000 genomes | rs3812111 |
| hgdp | rs3812111 |
| ensembl | rs3812111 |
| geneview | rs3812111 |
| scholar | rs3812111 |
| rs3812111 | |
| pharmgkb | rs3812111 |
| gwascentral | rs3812111 |
| openSNP | rs3812111 |
| 23andMe | rs3812111 |
| SNPshot | rs3812111 |
| SNPdbe | rs3812111 |
| MSV3d | rs3812111 |
| GWAS Ctlg | rs3812111 |
| GMAF | 0.4215 |
| Max Magnitude | 0 |
| ? | (A;A) (A;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 23455636 ]
|
| Trait | Age-related macular degeneration |
| Title | Seven new loci associated with age-related macular degeneration. |
| Risk Allele | T |
| P-val | 2E-8 |
| Odds Ratio | 1.10 [1.07-1.14] |
| ClinVar | |
|---|---|
| Risk | rs3812111(A;A) |
| Alt | rs3812111(A;A) |
| Reference | Rs3812111(T;T) |
| Significance | Untested |
| Disease | not provided |
| Variation | info |
| Gene | COL10A1 NT5DC1 |
| CLNDBN | not provided |
| Reversed | 0 |
| HGVS | NC_000006.11:g.116443735T>A |
| CLNSRC | |
| CLNACC | RCV000190301.1, |
