rs4148323
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | homozygous for UGT1A1*6 | |
(A;G) | carrier of 1 UGT1A1*6 allele | |
(G;G) | 0 | normal |
Reference | GRCh38 38.1/141 |
Chromosome | 2 |
Position | 233760498 |
Gene | UGT1A1, UGT1A3, UGT1A4, UGT1A5, UGT1A6, UGT1A7, UGT1A8, UGT1A9, UGT1A10 |
is a | snp |
is | mentioned by |
dbSNP | rs4148323 |
dbSNP (classic) | rs4148323 |
ClinGen | rs4148323 |
ebi | rs4148323 |
HLI | rs4148323 |
Exac | rs4148323 |
Gnomad | rs4148323 |
Varsome | rs4148323 |
LitVar | rs4148323 |
Map | rs4148323 |
PheGenI | rs4148323 |
Biobank | rs4148323 |
1000 genomes | rs4148323 |
hgdp | rs4148323 |
ensembl | rs4148323 |
geneview | rs4148323 |
scholar | rs4148323 |
rs4148323 | |
pharmgkb | rs4148323 |
gwascentral | rs4148323 |
openSNP | rs4148323 |
23andMe | rs4148323 |
SNPshot | rs4148323 |
SNPdbe | rs4148323 |
MSV3d | rs4148323 |
GWAS Ctlg | rs4148323 |
GMAF | 0.05234 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
Something seems wrong between dbSNP and the results from 23andMe and FTDNA. See Talk:Rs4148323 for more information.
rs4148323, a SNP also known as 211G>A or G71R, occurs in the UGT1A1 gene, and defines the UGT1A1*6 allele. This allele is associated with Gilbert's syndrome among Asians, Crigler-Najjar syndrome type II (CN-II), and transient familial neonatal hyperbilirubinemia.
[PMID 19243019] rs4148323(A) in exon 1 of the UGT1A1 gene is associated with hyperbilirubinemia.
[PMID 19343046] rs4148323 and several other nearby SNPs help predict serum total bilirubin levels, based on a study of 750 Japanese.
[PMID 19238116] Common variants of four bilirubin metabolism genes and their association with serum bilirubin and coronary artery disease in Chinese Han population
[PMID 20639394] Genome-wide association of serum bilirubin levels in Korean population
[PMID 22514612] Genetic Variations and Haplotype Diversity of the UGT1 Gene Cluster in the Chinese Population
ClinVar | |
---|---|
Risk | Rs4148323(A;A) |
Alt | Rs4148323(A;A) |
Reference | Rs4148323(G;G) |
Significance | Other |
Disease | Gilbert's syndrome Hyperbilirubinemia transient familial neonatal Bilirubin not specified Hyperbilirubinemia irinotecan response - Other SN-38 response - Other |
Variation | info |
Gene | UGT1A5 UGT1A3 UGT1A9 UGT1A6 UGT1A4 UGT1A1 UGT1A8 UGT1A10 UGT1A7 |
CLNDBN | Gilbert's syndrome Hyperbilirubinemia transient familial neonatal Bilirubin, serum level of, quantitative trait locus 1 not specified Hyperbilirubinemia irinotecan response - Other SN-38 response - Other |
Reversed | 0 |
HGVS | NC_000002.11:g.234669144G>A |
CLNSRC | OMIM Allelic Variant PharmGKB Clinical Annotation |
CLNACC | RCV000013071.27, RCV000022810.24, RCV000022811.2, RCV000173139.2, RCV000192783.1, RCV000211162.1, RCV000211250.1, |
[PMID 17424838] [Genetic polymorphisms of MPO, NQO1, GSTP1, UGT1A6 associated with susceptibility of chronic benzene poisoning].
[PMID 18547414] Genotyping panel for assessing response to cancer chemotherapy.
[PMID 19267064] [Relationship between genetic polymorphisms of phase I and phase II metabolizing enzymes and DNA damage of workers exposed to vinyl chloride monomer].
[PMID 19482841] Serum bilirubin levels on ICU admission are associated with ARDS development and mortality in sepsis.
[PMID 19572200] Prediction of deleterious non-synonymous single-nucleotide polymorphisms of human uridine diphosphate glucuronosyltransferase genes.
[PMID 20389299] Pazopanib-induced hyperbilirubinemia is associated with Gilbert's syndrome UGT1A1 polymorphism.
[PMID 23371916] A Genome-Wide Association Study for Serum Bilirubin Levels and Gene-Environment Interaction in a Chinese Population
[PMID 26413716] A GWAS Study on Liver Function Test Using eMERGE Network Participants
[PMID 29094205] Association between alanine aminotransferase elevation and UGT1A1*6 polymorphisms in daclatasvir and asunaprevir combination therapy for chronic hepatitis C.
- Is a snp
- In dbSNP
- SNPs on chromosome 2
- Has genotype
- Has population
- Uses omim
- On chip 23andMe v1
- On chip 23andMe v2
- On chip 23andMe v3
- On chip 23andMe v4
- On chip 23andMe v5
- On chip Affy GenomeWide 6
- On chip Ancestry v2
- On chip FTDNA2
- On chip HumanOmni1Quad
- On chip Illumina Human 1M
- On chip Ancestry v2c
- On chip Ancestry v2d