rs477515

Orientation

minus

Stabilized

minus

Make rs477515(C;C)

Make rs477515(C;T)

Make rs477515(T;T)

Reference

GRCh38 38.1/141

Chromosome

6

Position

32601914

is a	snp
is	mentioned by
dbSNP	rs477515
dbSNP (classic)	rs477515
ClinGen	rs477515
ebi	rs477515
HLI	rs477515
Exac	rs477515
Gnomad	rs477515
Varsome	rs477515
LitVar	rs477515
Map	rs477515
PheGenI	rs477515
Biobank	rs477515
1000 genomes	rs477515
hgdp	rs477515
ensembl	rs477515
geneview	rs477515
scholar	rs477515
google	rs477515
pharmgkb	rs477515
gwascentral	rs477515
openSNP	rs477515
23andMe	rs477515
SNPshot	rs477515
SNPdbe	rs477515
MSV3d	rs477515
GWAS Ctlg	rs477515

GMAF

0.2498

Max Magnitude

0

?	(C;C) (C;T) (T;T)	28

GWAS snp
PMID	[PMID 18758464]
Trait	Inflammatory bowel disease
Title	Loci on 20q13 and 21q22 are associated with pediatric-onset inflammatory bowel disease
Risk Allele
P-val	1E-8
Odds Ratio	1.38 [1.23-1.54]

[PMID 20018025] Genome-wide analysis of haplotype interaction for the data from the North American Rheumatoid Arthritis Consortium.

[PMID 20018071] Allelic based gene-gene interactions in rheumatoid arthritis.

[PMID 20018075] Genome-wide association study of rheumatoid arthritis by a score test based on wavelet transformation.

[PMID 20369022] Candidate causal regulatory effects by integration of expression QTLs with complex trait genetic associations.

GWAS snp
PMID	[PMID 23326239]
Trait	Epstein-Barr virus immune response (EBNA-1)
Title	A genome-wide integrative genomic study localizes genetic factors influencing antibodies against Epstein-Barr virus nuclear antigen 1 (EBNA-1).
Risk Allele	T
P-val	3E-13
Odds Ratio	.28 [NR] unit decrease

GWAS snp
PMID	[PMID 24282030]
Trait	Hepatitis B vaccine response
Title	A genome-wide association study identifies polymorphisms in the HLA-DR region associated with non-response to hepatitis B vaccination in Chinese Han populations.
Risk Allele	T
P-val	3E-19
Odds Ratio	2.05 [1.75-2.41]