rs4820599
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Make rs4820599(A;A) |
| Make rs4820599(A;G) |
| Make rs4820599(G;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 22 |
| Position | 24594246 |
| Gene | GGT1, LRRC75B |
| is a | snp |
| is | mentioned by |
| dbSNP | rs4820599 |
| dbSNP (classic) | rs4820599 |
| ClinGen | rs4820599 |
| ebi | rs4820599 |
| HLI | rs4820599 |
| Exac | rs4820599 |
| Gnomad | rs4820599 |
| Varsome | rs4820599 |
| LitVar | rs4820599 |
| Map | rs4820599 |
| PheGenI | rs4820599 |
| Biobank | rs4820599 |
| 1000 genomes | rs4820599 |
| hgdp | rs4820599 |
| ensembl | rs4820599 |
| geneview | rs4820599 |
| scholar | rs4820599 |
| rs4820599 | |
| pharmgkb | rs4820599 |
| gwascentral | rs4820599 |
| openSNP | rs4820599 |
| 23andMe | rs4820599 |
| SNPshot | rs4820599 |
| SNPdbe | rs4820599 |
| MSV3d | rs4820599 |
| GWAS Ctlg | rs4820599 |
| GMAF | 0.4155 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 18940312 ]
|
| Trait | Plasma levels of liver enzymes |
| Title | Population-based genome-wide association studies reveal six loci influencing plasma levels of liver enzymes |
| Risk Allele | G |
| P-val | 4E-11 |
| Odds Ratio | 0.01 [0.005-0.009] U/L increase |
| OMIM | 612365 |
| Desc | GAMMA GLUTAMYLTRANSFERASE, PLASMA LEVEL OF, QUANTITATIVE TRAIT LOCUS |
| Variant | |
| Related | also |
[PMID 20484958] Pooling-Based Genome-Wide Association Study Implicates Gamma-Glutamyltransferase 1 (GGT1) Gene in Pancreatic Carcinogenesis
| GWAS snp | |
|---|---|
| PMID | [PMID 21909109] |
| Trait | |
| Title | Large-scale genome-wide association studies in East Asians identify new genetic loci influencing metabolic traits. |
| Risk Allele | G |
| P-val | 7E-53 |
| Odds Ratio | 0.0088 [0.0076-0.0100] IU/L decrease |
[PMID 23462328] Variation in the γ-glutamyltransferase 1 gene and risk of chronic pancreatitis
