rs58596362
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 0 | common in clinvar |
(C;T) | 4 | Progeria - but more likely a technical/lab error |
Make rs58596362(T;T) |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 156138613 |
Gene | LMNA |
is a | snp |
is | mentioned by |
dbSNP | rs58596362 |
dbSNP (classic) | rs58596362 |
ClinGen | rs58596362 |
ebi | rs58596362 |
HLI | rs58596362 |
Exac | rs58596362 |
Gnomad | rs58596362 |
Varsome | rs58596362 |
LitVar | rs58596362 |
Map | rs58596362 |
PheGenI | rs58596362 |
Biobank | rs58596362 |
1000 genomes | rs58596362 |
hgdp | rs58596362 |
ensembl | rs58596362 |
geneview | rs58596362 |
scholar | rs58596362 |
rs58596362 | |
pharmgkb | rs58596362 |
gwascentral | rs58596362 |
openSNP | rs58596362 |
23andMe | rs58596362 |
SNPshot | rs58596362 |
SNPdbe | rs58596362 |
MSV3d | rs58596362 |
GWAS Ctlg | rs58596362 |
Max Magnitude | 4 |
rs58596362, also known as c.1824C>T and p.Gly608=, represents a rare mutation in the LMNA gene on chromosome 1.
The rare rs58596362(T) allele is reported to act as an autosomal dominant mutation leading to Hutchinson-Gilford progeria. However, this allele has been reported in data from 23andMe patients who lack progeria symptoms, so it seems likely that this is due to a technical error.
See also OMIM 150330.0022
ClinVar | |
---|---|
Risk | rs58596362(T;T) |
Alt | rs58596362(T;T) |
Reference | Rs58596362(C;C) |
Significance | Pathogenic |
Disease | Hutchinson-Gilford syndrome Lethal tight skin contracture syndrome not provided Laminopathy Mandibuloacral dysostosis |
Variation | info |
Gene | LMNA |
CLNDBN | Hutchinson-Gilford syndrome Lethal tight skin contracture syndrome not provided Laminopathy Mandibuloacral dysostosis |
Reversed | 0 |
HGVS | NC_000001.10:g.156108404C>T |
CLNSRC | HGMD OMIM Allelic Variant |
CLNACC | RCV000015593.30, RCV000015594.27, RCV000057364.5, RCV000150957.2, RCV000174182.1, |