rs6056
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in clinvar |
| Make rs6056(C;T) |
| Make rs6056(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 4 |
| Position | 154567669 |
| Gene | FGB |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6056 |
| dbSNP (classic) | rs6056 |
| ClinGen | rs6056 |
| ebi | rs6056 |
| HLI | rs6056 |
| Exac | rs6056 |
| Gnomad | rs6056 |
| Varsome | rs6056 |
| LitVar | rs6056 |
| Map | rs6056 |
| PheGenI | rs6056 |
| Biobank | rs6056 |
| 1000 genomes | rs6056 |
| hgdp | rs6056 |
| ensembl | rs6056 |
| geneview | rs6056 |
| scholar | rs6056 |
| rs6056 | |
| pharmgkb | rs6056 |
| gwascentral | rs6056 |
| openSNP | rs6056 |
| 23andMe | rs6056 |
| SNPshot | rs6056 |
| SNPdbe | rs6056 |
| MSV3d | rs6056 |
| GWAS Ctlg | rs6056 |
| GMAF | 0.1726 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20031577 ]
|
| Trait | Fibrinogen |
| Title | Novel Loci, Including Those Related to Crohn Disease, Psoriasis, and Inflammation Identified in a Genome-Wide Association Study of Fibrinogen in 17,686 Women: The Women's Genome Health Study |
| Risk Allele | A |
| P-val | 8E-39 |
| Odds Ratio | 12.94 [NR] mg/dl increase |
[PMID 18464913] A genome-wide association study identifies protein quantitative trait loci (pQTLs).
[PMID 20031576] Association of novel genetic Loci with circulating fibrinogen levels: a genome-wide association study in 6 population-based cohorts.
| ClinVar | |
|---|---|
| Risk | rs6056(T;T) |
| Alt | rs6056(T;T) |
| Reference | Rs6056(C;C) |
| Significance | Non-pathogenic |
| Disease | not specified Afibrinogenemia |
| Variation | info |
| Gene | FGB |
| CLNDBN | not specified Afibrinogenemia, congenital |
| Reversed | 0 |
| HGVS | NC_000004.11:g.155488821C>T |
| CLNSRC | |
| CLNACC | RCV000253184.1, RCV000278745.1, |
