rs63750586
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(-;-) | 0 | common in clinvar |
(-;A) | 6 | Lynch syndrome, pathogenic mutation |
(I;I) | 0 | common/normal (actually, a common error normally made by 23andMe; see explanation) |
Make rs63750586(A;A) |
Reference | GRCh38 38.1/141 |
Chromosome | 2 |
Position | 47429868 |
Gene | MSH2 |
is a | snp |
is | mentioned by |
dbSNP | rs63750586 |
dbSNP (classic) | rs63750586 |
ClinGen | rs63750586 |
ebi | rs63750586 |
HLI | rs63750586 |
Exac | rs63750586 |
Gnomad | rs63750586 |
Varsome | rs63750586 |
LitVar | rs63750586 |
Map | rs63750586 |
PheGenI | rs63750586 |
Biobank | rs63750586 |
1000 genomes | rs63750586 |
hgdp | rs63750586 |
ensembl | rs63750586 |
geneview | rs63750586 |
scholar | rs63750586 |
rs63750586 | |
pharmgkb | rs63750586 |
gwascentral | rs63750586 |
openSNP | rs63750586 |
23andMe | rs63750586 |
SNPshot | rs63750586 |
SNPdbe | rs63750586 |
MSV3d | rs63750586 |
GWAS Ctlg | rs63750586 |
Max Magnitude | 6 |
aka c.1203dupA (p.Gln402Thrfs)
ClinVar | |
---|---|
Risk | rs63750586(A;A) |
Alt | rs63750586(A;A) |
Reference | Rs63750586(-;-) |
Significance | Pathogenic |
Disease | Lynch syndrome |
Variation | info |
Gene | MSH2 |
CLNDBN | Lynch syndrome |
Reversed | 0 |
HGVS | NC_000002.11:g.47657007dupA |
CLNSRC | International Society for Gastrointestinal Hereditary Tumours |
CLNACC | RCV000076060.2, |