rs6421571
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common in complete genomics |
| Make rs6421571(C;T) |
| Make rs6421571(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 11 |
| Position | 118873063 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6421571 |
| dbSNP (classic) | rs6421571 |
| ClinGen | rs6421571 |
| ebi | rs6421571 |
| HLI | rs6421571 |
| Exac | rs6421571 |
| Gnomad | rs6421571 |
| Varsome | rs6421571 |
| LitVar | rs6421571 |
| Map | rs6421571 |
| PheGenI | rs6421571 |
| Biobank | rs6421571 |
| 1000 genomes | rs6421571 |
| hgdp | rs6421571 |
| ensembl | rs6421571 |
| geneview | rs6421571 |
| scholar | rs6421571 |
| rs6421571 | |
| pharmgkb | rs6421571 |
| gwascentral | rs6421571 |
| openSNP | rs6421571 |
| 23andMe | rs6421571 |
| SNPshot | rs6421571 |
| SNPdbe | rs6421571 |
| MSV3d | rs6421571 |
| GWAS Ctlg | rs6421571 |
| GMAF | 0.1722 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 21399635 ]
|
| Trait | |
| Title | Genome-wide association study identifies 12 new susceptibility loci for primary biliary cirrhosis |
| Risk Allele | C |
| P-val | 3E-12 |
| Odds Ratio | 1.3700 [1.25-1.50] |
[PMID 22707196] C-X-C chemokine receptor type 5 gene polymorphisms are associated with non-Hodgkin lymphoma.
[PMID 24833093] C-X-C chemokine receptor type 5 gene polymorphism affects gene expression in CD4+ T cells and is associated with increased risk of colorectal cancer
