rs6857
From SNPedia
| Orientation | minus |
| Stabilized | minus |
| Geno | Mag | Summary |
|---|---|---|
| (G;G) | 0 | common/normal |
| Make rs6857(A;A) |
| Make rs6857(A;G) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 19 |
| Position | 44888997 |
| Gene | NECTIN2 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs6857 |
| dbSNP (classic) | rs6857 |
| ClinGen | rs6857 |
| ebi | rs6857 |
| HLI | rs6857 |
| Exac | rs6857 |
| Gnomad | rs6857 |
| Varsome | rs6857 |
| LitVar | rs6857 |
| Map | rs6857 |
| PheGenI | rs6857 |
| Biobank | rs6857 |
| 1000 genomes | rs6857 |
| hgdp | rs6857 |
| ensembl | rs6857 |
| geneview | rs6857 |
| scholar | rs6857 |
| rs6857 | |
| pharmgkb | rs6857 |
| gwascentral | rs6857 |
| openSNP | rs6857 |
| 23andMe | rs6857 |
| SNPshot | rs6857 |
| SNPdbe | rs6857 |
| MSV3d | rs6857 |
| GWAS Ctlg | rs6857 |
| GMAF | 0.1148 |
| Max Magnitude | 0 |
| ? | (A;A) (A;G) (G;G) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 22005931 ]
|
| Trait | |
| Title | Genome-wide association analysis of age-at-onset in Alzheimer's disease. |
| Risk Allele | |
| P-val | 2E-10 |
| Odds Ratio | None None |
[PMID 17434289] Comprehensive analysis of APOE and selected proximate markers for late-onset Alzheimer's disease: patterns of linkage disequilibrium and disease/marker association.
[PMID 19265542] Performance of random forest when SNPs are in linkage disequilibrium.
| GWAS snp | |
|---|---|
| PMID | [PMID 23326517]
|
| Trait | Age-related macular degeneration |
| Title | Insights into the genetic architecture of early stage age-related macular degeneration: a genome-wide association study meta-analysis. |
| Risk Allele | |
| P-val | 1E-6 |
| Odds Ratio | 1.23 [1.14-1.35] |
| GWAS snp | |
|---|---|
| PMID | [PMID 23419831]
|
| Trait | Alzheimer's disease biomarkers |
| Title | APOE and BCHE as modulators of cerebral amyloid deposition: a florbetapir PET genome-wide association study. |
| Risk Allele | T |
| P-val | 1E-10 |
| Odds Ratio | NR NR |
