rs6896702
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 1 | Normal risk of developing Parkinson's Disease |
(C;T) | 1.5 | Slightly increased risk of developing Parkinson's Disease |
(T;T) | 2 | Increased risk of developing Parkinson's Disease |
Reference | GRCh38 38.1/141 |
Chromosome | 5 |
Position | 9331736 |
Gene | SEMA5A |
is a | snp |
is | mentioned by |
dbSNP | rs6896702 |
dbSNP (classic) | rs6896702 |
ClinGen | rs6896702 |
ebi | rs6896702 |
HLI | rs6896702 |
Exac | rs6896702 |
Gnomad | rs6896702 |
Varsome | rs6896702 |
LitVar | rs6896702 |
Map | rs6896702 |
PheGenI | rs6896702 |
Biobank | rs6896702 |
1000 genomes | rs6896702 |
hgdp | rs6896702 |
ensembl | rs6896702 |
geneview | rs6896702 |
scholar | rs6896702 |
rs6896702 | |
pharmgkb | rs6896702 |
gwascentral | rs6896702 |
openSNP | rs6896702 |
23andMe | rs6896702 |
SNPshot | rs6896702 |
SNPdbe | rs6896702 |
MSV3d | rs6896702 |
GWAS Ctlg | rs6896702 |
GMAF | 0.3219 |
Max Magnitude | 2 |
? | (C;C) (C;T) (T;T) | 28 |
---|---|---|
|
Rs6896702 | |
---|---|
PubMed | [PMID 16252231] |
Affy Probeset | SNP_A-8488227 |
Affy Orientation | reverse |
On GW 5.0 | |
Alleles A/B | A/G |
Ancestral | C |
Population | |
Allele | T |
Case Freq. | |
Control Freq. | |
Odds Ratio Het | |
Odds Ratio Hom | |
Odds Ratio All | 1.74 |
Disease | Parkinson's disease (PKD) |
rs6896702 is in linkage disequilibrium with a polymorphism that increases susceptibility to Parkinson's disease 1.74 times for carriers of the T allele [PMID 16252231]