rs964201
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 2 | |
(A;G) | 1.1 | |
(G;G) | 0 | common in complete genomics |
Reference | GRCh38 38.1/141 |
Chromosome | 1 |
Position | 197101771 |
Gene | ASPM |
is a | snp |
is | mentioned by |
dbSNP | rs964201 |
dbSNP (classic) | rs964201 |
ClinGen | rs964201 |
ebi | rs964201 |
HLI | rs964201 |
Exac | rs964201 |
Gnomad | rs964201 |
Varsome | rs964201 |
LitVar | rs964201 |
Map | rs964201 |
PheGenI | rs964201 |
Biobank | rs964201 |
1000 genomes | rs964201 |
hgdp | rs964201 |
ensembl | rs964201 |
geneview | rs964201 |
scholar | rs964201 |
rs964201 | |
pharmgkb | rs964201 |
gwascentral | rs964201 |
openSNP | rs964201 |
23andMe | rs964201 |
SNPshot | rs964201 |
SNPdbe | rs964201 |
MSV3d | rs964201 |
GWAS Ctlg | rs964201 |
GMAF | 0.002755 |
Max Magnitude | 2 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
rs964201 is an A/G SNP located in the ASPM gene. The G-allele of this SNP as well as the A-allele of rs3762271 another SNP located in the ASPM gene and rs2442496 a SNP in the MCPH1 gene arose approximately 50,000 years ago and show strong positive selection in the lineage leading to humans. [PMID 16151010] A comment is found at g2b2mh.
ClinVar | |
---|---|
Risk | Rs964201(G;G) |
Alt | Rs964201(G;G) |
Reference | Rs964201(A;A) |
Significance | Non-pathogenic |
Disease | Primary autosomal recessive microcephaly 5 not specified Primary Microcephaly |
Variation | info |
Gene | ASPM |
CLNDBN | Primary autosomal recessive microcephaly 5 not specified Primary Microcephaly, Recessive |
Reversed | 0 |
HGVS | NC_000001.10:g.197070901A>G |
CLNSRC | UniProtKB (protein) |
CLNACC | RCV000020789.1, RCV000145183.6, RCV000332016.1, |