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rs13405728

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(A;A) 0 common in complete genomics
Make rs13405728(A;G)
Make rs13405728(G;G)
ReferenceGRCh38 38.1/141
Chromosome2
Position48751020
GeneLHCGR, STON1-GTF2A1L
is asnp
is mentioned by
dbSNPrs13405728
ebirs13405728
HLIrs13405728
Exacrs13405728
Varsomers13405728
Maprs13405728
PheGenIrs13405728
hapmaprs13405728
1000 genomesrs13405728
hgdprs13405728
ensemblrs13405728
gopubmedrs13405728
geneviewrs13405728
scholarrs13405728
googlers13405728
pharmgkbrs13405728
gwascentralrs13405728
openSNPrs13405728
23andMers13405728
23andMe allrs13405728
SNP Nexus

SNPshotrs13405728
SNPdbers13405728
MSV3drs13405728
GWAS Ctlgrs13405728
GMAF0.2048
Max Magnitude0
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 21151128]
Trait
Title Genome-wide association study identifies susceptibility loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21 and 9q33
Risk Allele A
P-val 8E-21
Odds Ratio 1.4100 [1.30-1.49]


[PMID 22009367] Susceptibility Loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21, and 9q33.3 in a cohort of caucasian women


[PMID 22081247] Family-based analysis of susceptibility loci for polycystic ovary syndrome on chromosome 2p16.3, 2p21 and 9q33.3

[PMID 22504079] Association of polycystic ovary syndrome susceptibility single nucleotide polymorphism rs2479106 and PCOS in Caucasian patients with PCOS or hirsutism as referral diagnosis.

[PMID 22547425OA-icon.png] Variants in DENND1A Are Associated with Polycystic Ovary Syndrome in Women of European Ancestry.


[PMID 23208300] Genotype-phenotype correlations of PCOS susceptibility SNPs identified by GWAS in a large cohort of Han Chinese women


[PMID 22902918] Variants in DENND1A and LHCGR are associated with endometrioid adenocarcinoma

GWAS snp
PMID [PMID 22885925]
Trait Polycystic ovary syndrome
Title Genome-wide association study identifies eight new risk loci for polycystic ovary syndrome.
Risk Allele A
P-val 4E-9
Odds Ratio 1.35 [NR]