rs144143780
From SNPedia
Orientation | plus |
Stabilized | plus |
Geno | Mag | Summary |
---|---|---|
(C;C) | 8 | Sanfilippo syndrome type A |
(C;T) | 3 | Carrier for a Sanfilippo syndrome type A mutation |
(T;T) | 0 | common/normal |
Reference | GRCh38.p7 38.3/149 |
Chromosome | 17 |
Position | 80210822 |
Gene | SGSH |
is a | snp |
is | mentioned by |
dbSNP | rs144143780 |
dbSNP (classic) | rs144143780 |
ClinGen | rs144143780 |
ebi | rs144143780 |
HLI | rs144143780 |
Exac | rs144143780 |
Gnomad | rs144143780 |
Varsome | rs144143780 |
LitVar | rs144143780 |
Map | rs144143780 |
PheGenI | rs144143780 |
Biobank | rs144143780 |
1000 genomes | rs144143780 |
hgdp | rs144143780 |
ensembl | rs144143780 |
geneview | rs144143780 |
scholar | rs144143780 |
rs144143780 | |
pharmgkb | rs144143780 |
gwascentral | rs144143780 |
openSNP | rs144143780 |
23andMe | rs144143780 |
SNPshot | rs144143780 |
SNPdbe | rs144143780 |
MSV3d | rs144143780 |
GWAS Ctlg | rs144143780 |
Max Magnitude | 8 |
rs144143780, also known as c.1139A>G, p.Gln380Arg and Q380R, represents a rare mutation in the SGSH gene on chromosome 17.
Although still rare, the Q380R mutation is considered one of the most frequent pathogenic mutations associated with Sanfilippo syndrome type A, a recessively inherited disorder also known as mucopolysaccharidosis type IIIA (MPS3A).[PMID 21061399]
ClinVar | |
---|---|
Risk | Rs144143780(C;C) |
Alt | Rs144143780(C;C) |
Reference | Rs144143780(T;T) |
Significance | Pathogenic |
Disease | not provided |
Variation | info |
Gene | SGSH |
CLNDBN | not provided |
Reversed | 0 |
HGVS | NC_000017.10:g.78184621T>C |
CLNSRC | |
CLNACC | RCV000309724.1, |