rs17342717
From SNPedia
| Orientation | plus |
| Stabilized | plus |
| Geno | Mag | Summary |
|---|---|---|
| (C;C) | 0 | common on affy axiom data |
| Make rs17342717(C;T) |
| Make rs17342717(T;T) |
| Reference | GRCh38 38.1/141 |
| Chromosome | 6 |
| Position | 25821542 |
| Gene | SLC17A1 |
| is a | snp |
| is | mentioned by |
| dbSNP | rs17342717 |
| dbSNP (classic) | rs17342717 |
| ClinGen | rs17342717 |
| ebi | rs17342717 |
| HLI | rs17342717 |
| Exac | rs17342717 |
| Gnomad | rs17342717 |
| Varsome | rs17342717 |
| LitVar | rs17342717 |
| Map | rs17342717 |
| PheGenI | rs17342717 |
| Biobank | rs17342717 |
| 1000 genomes | rs17342717 |
| hgdp | rs17342717 |
| ensembl | rs17342717 |
| geneview | rs17342717 |
| scholar | rs17342717 |
| rs17342717 | |
| pharmgkb | rs17342717 |
| gwascentral | rs17342717 |
| openSNP | rs17342717 |
| 23andMe | rs17342717 |
| SNPshot | rs17342717 |
| SNPdbe | rs17342717 |
| MSV3d | rs17342717 |
| GWAS Ctlg | rs17342717 |
| GMAF | 0.03765 |
| Max Magnitude | 0 |
| ? | (C;C) (C;T) (T;T) | 28 |
|---|---|---|
|
| ||
| GWAS snp | |
|---|---|
| PMID | [PMID 20927387 ]
|
| Trait | |
| Title | A genome-wide association study of red blood cell traits using the electronic medical record |
| Risk Allele | T |
| P-val | 5E-8 |
| Odds Ratio | 0.38 [0.24-0.52] unit increase |
| GWAS snp | |
|---|---|
| PMID | [PMID 21208937]
|
| Trait | |
| Title | Identification of a common variant in the TFR2 gene implicated in the physiological regulation of serum iron levels |
| Risk Allele | C |
| P-val | 5E-9 |
| Odds Ratio | 36.5000 [24.27-48.73] ng/ml decrease |
| GWAS snp | |
|---|---|
| PMID | [PMID 21149283]
|
| Trait | |
| Title | Novel Association to the Proprotein Convertase PCSK7 Gene Locus Revealed by Analysing Soluble Transferrin Receptor (sTfR) Levels |
| Risk Allele | T |
| P-val | 9E-10 |
| Odds Ratio | 0.0870 [0.06-0.12] unit increase |
