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rs3790844

From SNPedia

Orientationminus
Stabilizedminus
Geno Mag Summary
(C;C) 2 reduced risk (0.59x) of pancreatic cancer
(C;T) 1.5 slightly reduced risk (0.77x) for pancreatic cancer
(T;T) 0 common/normal
ReferenceGRCh38 38.1/141
Chromosome1
Position200038304
GeneNR5A2
is asnp
is mentioned by
dbSNPrs3790844
ebirs3790844
HLIrs3790844
Exacrs3790844
Varsomers3790844
Maprs3790844
PheGenIrs3790844
hapmaprs3790844
1000 genomesrs3790844
hgdprs3790844
ensemblrs3790844
gopubmedrs3790844
geneviewrs3790844
scholarrs3790844
googlers3790844
pharmgkbrs3790844
gwascentralrs3790844
openSNPrs3790844
23andMers3790844
23andMe allrs3790844
SNP Nexus

SNPshotrs3790844
SNPdbers3790844
MSV3drs3790844
GWAS Ctlgrs3790844
GMAF0.3453
Max Magnitude2
? (C;C) (C;T) (T;T) 28
CPMC Logo.png

This SNP has been recognized by the Coriell Personalized Medicine Collaborative ICOB.
Additional information is available here

GWAS snp
PMID [PMID 20101243OA-icon.png]
Trait Pancreatic cancer
Title A genome-wide association study identifies pancreatic cancer susceptibility loci on chromosomes 13q22.1, 1q32.1 and 5p15.33
Risk Allele T
P-val 2E-10
Odds Ratio 1.30 [1.19-1.41]

23andMe reports that the G allele of this SNP appears to lower the risk of pancreatic cancer. [PMID 20101243OA-icon.png]

OMIM260350
Desc
Variant
Relatedalso
[PMID 20686608OA-icon.png] Genome-wide association study of pancreatic cancer in Japanese population.