From SNPedia
rs3817198, a SNP associated with the
LSP1 gene, was one of the four strongest associating SNPs found in a genome-wide association study of over 4,000
breast cancer samples.[
PMID 17529967]
| ? | (C;C) (C;T) (T;T) |
|---|
 |
| GWAS
|
| SNP
| rs3817198
|
| PubMedID
| [PMID 17529967]
|
| Condition
| Breast cancer
|
| Gene
| LSP1
|
| Risk Allele
| T
|
| pValue
| 3.00E-009
|
| OR
| 1.07
|
| 95% CI
| 1.04-1.11
|
Related to LYMPHOCYTE-SPECIFIC PROTEIN; LSP1
according to
omim 153432. See
also
[PMID 19656774] Common variants in LSP1, 2q35 and 8q24 and breast cancer risk for BRCA1 and BRCA2 mutation carriers
| PharmGKB | PA162356624 |
| Name | |
| Annotation | GWAS Results: Genome-wide association study identifies novel breast cancer susceptibility loci (Initial Sample Size: 390 cases, 364 controls; Replication Sample Size: 26,646 cases, 24,889 controls; Risk Allele: rs3817198-T). |
| Gene | LSP1 |
| Featue | |
| Evidence | PubMed ID:17529967; Web Resource:http://www.genome.gov/gwastudies/ |
| Drugs | |
| Diseases | Breast Neoplasms |
| Curation Level | Non-Curated |
