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rs6590330

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(G;G) 0 common in complete genomics
Make rs6590330(A;A)
Make rs6590330(A;G)
ReferenceGRCh38 38.1/141
Chromosome11
Position128441164
is asnp
is mentioned by
dbSNPrs6590330
ebirs6590330
HLIrs6590330
Exacrs6590330
Varsomers6590330
Maprs6590330
PheGenIrs6590330
hapmaprs6590330
1000 genomesrs6590330
hgdprs6590330
ensemblrs6590330
gopubmedrs6590330
geneviewrs6590330
scholarrs6590330
googlers6590330
pharmgkbrs6590330
gwascentralrs6590330
openSNPrs6590330
23andMers6590330
23andMe allrs6590330
SNP Nexus

SNPshotrs6590330
SNPdbers6590330
MSV3drs6590330
GWAS Ctlgrs6590330
GMAF0.2071
Max Magnitude0
? (A;A) (A;G) (G;G) 28
GWAS snp
PMID [PMID 19838193]
Trait Systemic lupus erythematosus
Title Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus
Risk Allele A
P-val 2E-25
Odds Ratio 1.37 [1.29-1.45)


[PMID 20516000] TNIP1, SLC15A4, ETS1, RasGRP3 and IKZF1 are associated with clinical features of systemic lupus erythematosus in Chinese Han population


[PMID 20169177OA-icon.png] Genome-wide association study in Asian populations identifies variants in ETS1 and WDFY4 associated with systemic lupus erythematosus.


GET Evidence
rs6590330
aa_change
aa_change_short
impact pathogenic
qualified_impact Insufficiently evaluated pathogenic
overall_frequency 0.15625
summary



GWAS snp
PMID [PMID 23273568OA-icon.png]
Trait Systemic lupus erythematosus
Title Meta-analysis followed by replication identifies loci in or near CDKN1B, TET3, CD80, DRAM1, and ARID5B as associated with systemic lupus erythematosus in Asians.
Risk Allele A
P-val 3E-8
Odds Ratio 1.51