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rs6603272

From SNPedia

Orientationplus
Stabilizedplus
Geno Mag Summary
(G;G) 2 >2.74x increased risk of developing schizophrenia
(G;T) 2 2.74x increased risk of developing schizophrenia
(T;T) 1 Normal risk of developing schizophrenia
ReferenceGRCh38 38.1/141
ChromosomeY
Position1352245
GeneIL3RA, LOC101928055
is asnp
is mentioned by
dbSNPrs6603272
ebirs6603272
HLIrs6603272
Exacrs6603272
Varsomers6603272
Maprs6603272
PheGenIrs6603272
hapmaprs6603272
1000 genomesrs6603272
hgdprs6603272
ensemblrs6603272
gopubmedrs6603272
geneviewrs6603272
scholarrs6603272
googlers6603272
pharmgkbrs6603272
gwascentralrs6603272
openSNPrs6603272
23andMers6603272
23andMe allrs6603272
SNP Nexus

SNPshotrs6603272
SNPdbers6603272
MSV3drs6603272
GWAS Ctlgrs6603272
Y Chromrs6603272
GMAF0.3049
Max Magnitude2
? (G;G) (G;T) (T;T) 28
This snp is in the Pseudoautosomal region.

rs6603272, part of a haplotype block spanning introns 4, 5 and 6 of the IL3RA gene, has been reported in a whole genome association study to be associated with schizophrenia. (The other SNPs in this block are rs6422441 and rs17883192.)

The risk allele (oriented to the dbSNP entry) is (G); the odds ratio associated with this allele is 2.74. [PMID 17522711]


[PMID 19281803] A family-based study of the IL3RA gene on susceptibility to schizophrenia in a Chinese Han population


[PMID 18547720] Association between interleukin-3 receptor alpha polymorphism and schizophrenia in the Chinese population.