rs80358019
From SNPedia
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0 | common in clinvar |
(A;C) | 5 | BRCA1 variant considered pathogenic for breast cancer |
(A;G) | 5 | BRCA1 variant considered pathogenic for breast cancer |
Make rs80358019(G;G) |
Reference | GRCh38 38.1/141 |
Chromosome | 17 |
Position | 43091034 |
Gene | BRCA1 |
is a | snp |
is | mentioned by |
dbSNP | rs80358019 |
dbSNP (classic) | rs80358019 |
ClinGen | rs80358019 |
ebi | rs80358019 |
HLI | rs80358019 |
Exac | rs80358019 |
Gnomad | rs80358019 |
Varsome | rs80358019 |
LitVar | rs80358019 |
Map | rs80358019 |
PheGenI | rs80358019 |
Biobank | rs80358019 |
1000 genomes | rs80358019 |
hgdp | rs80358019 |
ensembl | rs80358019 |
geneview | rs80358019 |
scholar | rs80358019 |
rs80358019 | |
pharmgkb | rs80358019 |
gwascentral | rs80358019 |
openSNP | rs80358019 |
23andMe | rs80358019 |
SNPshot | rs80358019 |
SNPdbe | rs80358019 |
MSV3d | rs80358019 |
GWAS Ctlg | rs80358019 |
Max Magnitude | 5 |
c.4097-2A>C and also c.4097-2A>G
considered pathogenic for breast cancer in ClinVar
ClinVar | |
---|---|
Risk | rs80358019(C;C) rs80358019(G;G) |
Alt | rs80358019(C;C) rs80358019(G;G) |
Reference | Rs80358019(A;A) |
Significance | Pathogenic |
Disease | Familial cancer of breast Breast-ovarian cancer not provided |
Variation | info |
Gene | BRCA1 |
CLNDBN | Familial cancer of breast Breast-ovarian cancer, familial 1 not provided |
Reversed | 1 |
HGVS | NC_000017.10:g.41243051T>C; NC_000017.10:g.41243051T>G |
CLNSRC | Breast Cancer Information Core (BRCA1) |
CLNACC | RCV000048444.2, RCV000112256.1, RCV000159986.1, |