rs1001179
Orientation | minus |
Stabilized | minus |
Geno | Mag | Summary |
---|---|---|
(A;A) | 0.6x decreased acoustic neuroma risk | |
(A;G) | 0.6x decreased acoustic neuroma risk | |
(G;G) | normal |
Reference | GRCh38 38.1/141 |
Chromosome | 11 |
Position | 34438684 |
Gene | CAT |
is a | snp |
is | mentioned by |
dbSNP | rs1001179 |
dbSNP (classic) | rs1001179 |
ClinGen | rs1001179 |
ebi | rs1001179 |
HLI | rs1001179 |
Exac | rs1001179 |
Gnomad | rs1001179 |
Varsome | rs1001179 |
LitVar | rs1001179 |
Map | rs1001179 |
PheGenI | rs1001179 |
Biobank | rs1001179 |
1000 genomes | rs1001179 |
hgdp | rs1001179 |
ensembl | rs1001179 |
geneview | rs1001179 |
scholar | rs1001179 |
rs1001179 | |
pharmgkb | rs1001179 |
gwascentral | rs1001179 |
openSNP | rs1001179 |
23andMe | rs1001179 |
SNPshot | rs1001179 |
SNPdbe | rs1001179 |
MSV3d | rs1001179 |
GWAS Ctlg | rs1001179 |
GMAF | 0.123 |
Max Magnitude | 0 |
? | (A;A) (A;G) (G;G) | 28 |
---|---|---|
|
A study of non-Hispanic Caucasians with various types of brain tumors concluded that there was an decreased risk of acoustic neuroma (odds ratio 0.6, CI: 0.3-1.0) associated with the rs1001179(A) allele, as oriented in dbSNP orientation (and not as published).[PMID 18682580]
[PMID 19863340] Influence of the polymorphism in candidate genes on late cardiac damage in patients treated due to acute leukemia in childhood
[PMID 20110814] Air pollution and homocysteine: more evidence that oxidative stress-related genes modify effects of particulate air pollution
[PMID 21795425] Genetic Variation in Myeloperoxidase Modifies the Association of Serum {alpha}-Tocopherol with Aggressive Prostate Cancer among Current Smokers
[PMID 21338322] Parameters of oxidative stress, DNA damage and DNA repair in type 1 and type 2 diabetes mellitus
[PMID 22712453] Effects of rs769217 and rs1001179 polymorphisms of catalase gene on blood catalase, carbohydrate and lipid biomarkers in diabetes mellitus
[PMID 16385446] A testing framework for identifying susceptibility genes in the presence of epistasis.
[PMID 16453382] No evidence for a major effect of two common polymorphisms of the catalase gene in type 1 diabetes susceptibility.
[PMID 16820586] Inflammatory gene polymorphisms and risk of postoperative myocardial infarction after cardiac surgery.
[PMID 18248894] Short arm of chromosome 11 and sporadic Alzheimer's disease: catalase and cathepsin D gene polymorphisms.
[PMID 18483329] Effect modification by catalase genotype suggests a role for oxidative stress in the association of hormone replacement therapy with postmenopausal breast cancer risk.
[PMID 18606005] Detection of catalase as a major protein target of the lipid peroxidation product 4-HNE and the lack of its genetic association as a risk factor in SLE.
[PMID 18988661] Glutathione-S-transferase (GST) P1, GSTM1, exercise, ozone and asthma incidence in school children.
[PMID 19505917] Lead exposure, polymorphisms in genes related to oxidative stress, and risk of adult brain tumors.
[PMID 20049130] Black carbon exposure, oxidative stress genes, and blood pressure in a repeated-measures study.
[PMID 20445800] Genetic Polymorphisms in Genes Related to Oxidative Stress (GSTP1, GSTM1, GSTT1, CAT, MnSOD, MPO, eNOS) and Survival of Rectal Cancer Patients after Radiotherapy.
[PMID 23961996] A catalase promoter variant rs1001179 is associated with visual acuity but not with primary angle closure glaucoma in Saudi patients
[PMID 23363810] Prostate disease risk factors among a New Zealand cohort
[PMID 24215654] Analysis of Catalase SNP rs1001179 in Saudi patients with Primary Open Angle Glaucoma
[PMID 23053794] Polymorphisms in oxidative stress genes, physical activity, and breast cancer risk.
[PMID 23325794] Genetic polymorphisms in catalase and CYP1B1 determine DNA adduct formation by benzo(a)pyrene ex vivo.
[PMID 25248722] Genetic Polymorphism of CAT C-262 T and Susceptibility to Breast Cancer, a Case-Control Study and Meta-Analysis of the Literatures
[PMID 25573779] Host genetic variations in glutathione-S-transferases, superoxide dismutases and catalase genes influence susceptibility to malaria infection in an Indian population
[PMID 24517502] Gene variants encoding proteins involved in antioxidant defense system and the clinical expression of Wilson disease
[PMID 28542879] Catalase (CAT) promoter and 5'-UTR genetic variants lead to its altered expression and activity in vitiligo.
[PMID 31647334] Impact of oxidative stress SNPs and dietary antioxidant quality score on prostate cancer.